Pre_GI: BLASTP Hits

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Query: NC_012731:600518:645376 Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome

Start: 645376, End: 645507, Length: 132

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a liver abscess. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:4966471:498146349814634981594132Klebsiella pneumoniae 342 chromosome, complete genome1e-1892
NC_016514:506611:5140645140645153201257Enterobacter cloacae EcWSU1 chromosome, complete genomeprophage P4 integrase3e-1270.5
NC_020063:4127161:4140010414001041412631254Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase3e-1270.5
NC_013971:3296272:3324214332421433254911278Erwinia amylovora ATCC 49946 chromosome, complete genomeintegrase5e-1269.7
NC_013961:441719:4457984457984470751278Erwinia amylovora, complete genomeIntegrase5e-1269.7
NC_013592:446092:4505684505684518211254Dickeya dadantii Ech586, complete genomeintegrase family protein1e-1168.6
NC_008253:4735418:4735418473541847366801263Escherichia coli 536, complete genomeprophage P4 integrase1e-1168.2
NC_004547:442927:466210466210466377168Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase (partial)2e-1167.8
NC_016612:2009927:2022458202245820237231266Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage integrase family protein2e-1167.4
NC_009436:522649:5237605237605250221263Enterobacter sp. 638, complete genomephage integrase family protein4e-1166.6
CP002797:4603787:460814846081484608738591Escherichia coli NA114, complete genomePutative Prophage P4 integrase7e-1165.9
NC_010465:3431500:3443988344398834451961209Yersinia pseudotuberculosis YPIII, complete genomeintegrase family protein1e-0962
NC_013592:3212834:3216878321687832180831206Dickeya dadantii Ech586, complete genomeintegrase family protein1e-0961.6
NC_011415:4767892:477015847701584770313156Escherichia coli SE11 chromosome, complete genomeputative partial phage integrase6e-0959.7
NC_012125:4716000:4722575472257547238221248Salmonella enterica subsp. enterica serovar Paratyphi C strainintegrase5e-0959.7
CU928160:4570498:4575920457592045771701251Escherichia coli IAI1 chromosome, complete genomeProphage integrase5e-0959.7
NC_011741:4570498:4575920457592045771701251Escherichia coli IAI1 chromosome, complete genomeProphage integrase5e-0959.7
NC_012917:3241196:3247888324788832491021215Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-0858.9
NC_013421:1505176:1519062151906215202761215Pectobacterium wasabiae WPP163, complete genomeintegrase family protein1e-0858.5
NC_009436:3117661:3125655312565531269051251Enterobacter sp. 638, complete genomephage integrase family protein1e-0858.5
NC_020418:116500:1488691488691501371269Morganella morganii subsp. morganii KT, complete genomeprophage integrase2e-0858.2
NC_020418:116500:1294051294051306791275Morganella morganii subsp. morganii KT, complete genomeprophage integrase1e-0858.2
NC_009381:3680638:3701106370110637023651260Yersinia pestis Pestoides F chromosome, complete genomeintegrase2e-0857.8
NC_004547:3207776:3226143322614332273961254Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeintegrase3e-0857
NC_006511:4465495:447102744710274471185159Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-0856.6
NC_011147:4460726:446625744662574466415159Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-0856.6
NC_004337:4374500:4394738439473843959491212Shigella flexneri 2a str. 301, complete genomeputative P4-type integrase5e-0856.6
NC_004741:4364235:4386934438693443881451212Shigella flexneri 2a str. 2457T, complete genomeputative P4-type integrase5e-0856.6
NC_008258:4345400:4363338436333843645311194Shigella flexneri 5 str. 8401, complete genomeputative P4-type integrase5e-0856.6
NC_011283:5011497:5023932502393250252061275Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase5e-0856.6
NC_017328:4417000:4438449443844944396601212Shigella flexneri 2002017 chromosome, complete genomeputative P4-type integrase5e-0856.6
NC_011274:4538722:454640945464094546558150Salmonella enterica subsp. enterica serovar Gallinarum str. 287/914e-0856.6
NC_011294:4560902:456858945685894568744156Salmonella enterica subsp. enterica serovar Enteritidis str4e-0856.6
NC_013364:3701895:3705514370551437067731260Escherichia coli O111:H- str. 11128, complete genomeputative integrase6e-0856.2
NC_004741:3041294:3044913304491330461751263Shigella flexneri 2a str. 2457T, complete genomeputative P4-type integrase9e-0855.8
CU928145:4792703:4806663480666348079251263Escherichia coli 55989 chromosome, complete genomeProphage integrase9e-0855.8
NC_013353:5090696:5118420511842051196851266Escherichia coli O103:H2 str. 12009, complete genomeintegrase9e-0855.8
NC_013353:3627355:3627355362735536286201266Escherichia coli O103:H2 str. 12009, complete genomeintegrase9e-0855.8
NC_011601:3338888:3338888333888833401531266Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase9e-0855.8
NC_013716:5201097:5270252527025252715141263Citrobacter rodentium ICC168, complete genomeintegrase9e-0855.8
AP010958:3627355:3627355362735536286201266Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase9e-0855.8
AP010958:5090696:5118420511842051196851266Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase9e-0855.8
NC_011748:4792703:4806663480666348079251263Escherichia coli 55989, complete genomeProphage integrase9e-0855.8
NC_004337:3049118:3052737305273730539991263Shigella flexneri 2a str. 301, complete genomeputative P4-type integrase9e-0855.8
NC_011750:3545466:3545739354573935470041266Escherichia coli IAI39 chromosome, complete genomeProphage integrase7e-0855.8
NC_013941:3676146:3676146367614636774111266Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSite-specific recombinase, phage integrase family protein8e-0855.8
NC_013008:3911356:3911356391135639126211266Escherichia coli O157:H7 str. TW14359 chromosome, complete genomepathogenicity island integrase8e-0855.8
NC_011353:3956630:3956630395663039578951266Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family protein8e-0855.8
NC_008253:3122148:3128357312835731296221266Escherichia coli 536, complete genomeputative P4-type integrase8e-0855.8
NC_002695:3852233:3852233385223338534981266Escherichia coli O157:H7 str. Sakai, complete genomeintegrase8e-0855.8
NC_002655:3919545:3919545391954539208101266Escherichia coli O157:H7 EDL933, complete genomeputative pathogenicity island integrase8e-0855.8
NC_017328:3088907:3092526309252630937881263Shigella flexneri 2002017 chromosome, complete genomeSite-specific recombinase, phage integrase family protein9e-0855.8
NC_004431:4955658:4970125497012549713871263Escherichia coli CFT073, complete genomeProphage P4 integrase1e-0755.5
NC_011745:4862218:4879739487973948810011263Escherichia coli ED1a chromosome, complete genomeProphage integrase1e-0755.5
NC_004547:1873390:1925682192568219269591278Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage integrase2e-0754.7
NC_007384:3383983:3401956340195634029601005Shigella sonnei Ss046, complete genome2e-0754.7
NC_007712:3629358:364218736421873643062876Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-0753.5
NC_011149:1987291:1996529199652919978031275Salmonella enterica subsp. enterica serovar Agona str. SL483,integrase6e-0753.1
NC_011601:2139188:2171614217161421728821269Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase1e-0651.6
NC_004431:4270305:4274702427470242758861185Escherichia coli CFT073, complete genomePutative prophage integrase1e-0651.6
NC_012967:3769499:3775658377565837768421185Escherichia coli B str. REL606 chromosome, complete genomeInt1e-0651.6
NC_013421:1696746:1714725171472517160021278Pectobacterium wasabiae WPP163, complete genomeintegrase family protein2e-0650.8
NC_008253:3941938:3948173394817339493541182Escherichia coli 536, complete genomeputative phage integrase2e-0650.8
NC_010694:436500:4418324418324428841053Erwinia tasmaniensis, complete genomePutative P4-type integrase2e-0650.8
NC_012214:1650523:1670282167028216714991218Erwinia pyrifoliae Ep1/96, complete genomePhage integrase family protein6e-0649.3