Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1237394 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1237394, End: 1239724, Length: 2331

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2334979:2334979233497923373452367Salmonella enterica subsp. enterica serovar Enteritidis strsecreted effector protein01133
NC_011205:2462025:2462025246202524643912367Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein01133
NC_004631:685357:7045107045107068762367Salmonella enterica subsp. enterica serovar Typhi Ty2, completesecreted effector protein01129
NC_003198:2297837:2297837229783723002032367Salmonella enterica subsp. enterica serovar Typhi str. CT18,secreted effector protein01129
NC_016832:687000:7044647044647068302367Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,E3 ubiquitin-protein ligase sspH201129
NC_011080:2342672:2342672234267223450382367Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein01129
NC_010102:683444:7025587025587049242367Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01128
NC_011083:2375061:2388465238846523908312367Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,leucine-rich repeat protein01128
NC_003197:2327474:2340885234088523432512367Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein01128
NC_016810:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein01128
NC_016856:2379027:2392438239243823948042367Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein01128
NC_016857:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein01128
NC_016860:2323017:2336428233642823387942367Salmonella enterica subsp. enterica serovar Typhimurium strleucine-rich repeat protein01128
NC_016863:2324293:2340630234063023429962367Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein01128
NC_017046:2324554:2337965233796523403312367Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted effector protein01128
NC_012125:1517925:1537079153707915392652187Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein01067
NC_010067:892729:9070099070099092762268Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein01030
NC_010067:191190:1956651956651977012037Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0900
NC_012779:1286500:1320729132072913231072379Edwardsiella ictaluri 93-146, complete genomeleucine-rich repeat protein0721
NC_016856:1326503:1332051133205113341532103Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SSspH10637
NC_012779:1286500:1318047131804713201612115Edwardsiella ictaluri 93-146, complete genomeSspH11e-180633
NC_015761:1181186:1188971118897111914122442Salmonella bongori NCTC 12419, complete genomeleucine rich repeat virulence protein4e-123442
NC_015761:1181186:1206110120611012087912682Salmonella bongori NCTC 12419, complete genomeleucine rich-repeat virulence protein1e-118427
NC_007384:1320287:1346060134606013478111752Shigella sonnei Ss046, complete genomeinvasion plasmid antigen2e-103377
NC_010465:804249:8208868208868227331848Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein8e-98358
NC_017168:4509918:4526115452611545279951881Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein3e-94347
NC_008149:3648139:3669702366970236715821881Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein3e-94347
NC_008150:3711953:3723173372317337250531881Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein3e-94347
NC_017154:848500:8700868700868719331848Yersinia pestis D106004 chromosome, complete genomeantigenic leucine-rich repeat protein5e-94346
NC_010465:804249:8173048173048191721869Yersinia pseudotuberculosis YPIII, complete genomeputative antigenic leucine-rich repeat protein5e-94346
NC_017319:192482:2130342130342147611728Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery3e-91337
NC_004851:191709:2131522131522148791728Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery3e-91337
NC_017168:4509918:4522652452265245244691818Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein7e-90332
NC_017154:848500:8665908665908684071818Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein7e-90332
NC_008150:3711953:3727411372741137292281818Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein7e-90332
NC_008258:2045000:2055196205519620568391644Shigella flexneri 5 str. 8401, complete genomeinvasion plasmid antigen2e-89330
NC_017328:2090679:2102130210213021037731644Shigella flexneri 2002017 chromosome, complete genomeInvasion plasmid antigen2e-89330
NC_004741:2009769:2023205202320520248481644Shigella flexneri 2a str. 2457T, complete genomeinvasion plasmid antigen2e-89330
NC_008149:3648139:3666229366622936680551827Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein2e-89330
NC_007613:1038000:1044320104432010459631644Shigella boydii Sb227, complete genomeinvasion plasmid antigen8e-89328
NC_017249:8165826:8165826816582681675711746Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-62241
NC_004463:2059500:2059723205972320614801758Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-62241
NC_010067:2304313:2319780231978023208591080Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-61237
NC_007607:87000:1104271104271119711545Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceinvasion plasmid antigen, fragment6e-56219
NC_011205:1107998:111844311184431119411969Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein5e-46186
NC_011294:1006630:101781610178161018784969Salmonella enterica subsp. enterica serovar Enteritidis strtype III secreted protein5e-46186
NC_010067:1782998:1799793179979318009831191Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-37156
NC_010465:804249:819734819734820639906Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein9e-28125
NC_008255:3331613:3332977333297733352682292Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein with multiple leucine-rich repeat domains3e-26120
NC_010337:98974:1205681205681293908823Heliobacterium modesticaldum Ice1, complete genomemultidomain protein with s-layer homology region, glug motif, ig motif, i-set domain, pkd domain7e-25116
NC_008150:3711953:372561637256163726491876Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein3e-20101
NC_008149:3648139:366826436682643669139876Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein3e-20101
NC_017154:848500:868615868615869490876Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein3e-20101
NC_017168:4509918:452467745246774525552876Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein3e-20101
NC_010634:3155741:3157433315743331585721140Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-1688.6
NC_006155:3237990:3239683323968332408221140Yersinia pseudotuberculosis IP 32953, complete genomeputative antigenic leucine-rich repeat protein2e-1688.6
NC_017249:8283701:831025483102548310592339Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-1273.9
NC_004463:1898648:194677319467731947111339Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-1273.9
NC_003197:2720726:2728976272897627304691494Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein5e-0860.5
NC_016856:2773995:2780529278052927820221494Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-0860.5
NC_016857:2719779:2726693272669327281861494Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein5e-0860.5
NC_016863:2721826:2728740272874027302331494Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-0860.5
NC_011080:2722492:2729050272905027305191470Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein6e-0860.1
NC_016810:2719779:2726717272671727281861470Salmonella enterica subsp. enterica serovar Typhimurium strleucine rich hypothetical protein6e-0860.1
NC_016860:2716152:2724426272442627258951470Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-0860.1
NC_017046:2717810:2726084272608427275531470Salmonella enterica subsp. enterica serovar Typhimurium str. 798leucine rich hypothetical protein6e-0860.1
NC_015572:2186394:2214273221427322157871515Methylomonas methanica MC09 chromosome, complete genomeadenylate cyclase1e-0655.8
NC_001263:72681:7268172681770844404Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein2e-0655.1
NC_013929:3953046:396206539620653962988924Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0654.7
NC_015376:2010009:2029236202923620305641329Burkholderia gladioli BSR3 chromosome chromosome 2, completeProtein kinase3e-0654.3