Pre_GI: BLASTP Hits

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Query: NC_010501:5735656:5771657 Pseudomonas putida W619, complete genome

Start: 5771657, End: 5773339, Length: 1683

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:5298500:5320263532026353219361674Azotobacter vinelandii CA6, complete genomeputative inner membrane protein translocase component YidC0805
NC_012560:5338707:5362371536237153640441674Azotobacter vinelandii DJ, complete genomeinner membrane protein, translocase subunit YidC0805
NC_002516:6255854:6261828626182862635641737Pseudomonas aeruginosa PAO1, complete genomeputative inner membrane protein translocase component YidC0795
NC_009092:4585784:4599900459990046015281629Shewanella loihica PV-4, complete genome60 kDa inner membrane insertion protein1e-131470
NC_014315:3319865:3326091332609133277281638Nitrosococcus watsoni C-113 chromosome, complete genomemembrane protein insertase9e-125447
NC_020260:3931567:3936634393663439382861653Cronobacter sakazakii Sp291, complete genomemembrane protein insertase9e-124444
NC_015968:4790239:4810307481030748119501644Enterobacter asburiae LF7a chromosome, complete genomeMembrane protein oxaA3e-123442
NC_014228:4408500:4429648442964844312821635Xenorhabdus nematophila ATCC 19061, complete genomepreprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component1e-121437
NC_009648:4497749:4498012449801244996581647Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative inner membrane protein translocase component YidC2e-121436
NC_004337:3590323:3866037386603738676831647Shigella flexneri 2a str. 301, complete genomeinner membrane protein translocase component YidC1e-119430
NC_014733:2851984:2859796285979628614451650Methylovorus sp. MP688 chromosome, complete genome60 kda inner membrane insertion protein4e-116419
NC_003295:3688000:1431143130921662Ralstonia solanacearum GMI1000, complete genomeputative inner membrane protein translocase component YidC6e-114411
NC_012856:3615550:3644984364498436466481665Ralstonia pickettii 12D chromosome 1, complete genome60 kDa inner membrane insertion protein6e-111401
NC_009076:75535:1042171042171058931677Burkholderia pseudomallei 1106a chromosome I, complete sequencemembrane protein OxaA7e-111401
NC_008825:4025705:4041447404144740431081662Methylibium petroleiphilum PM1, complete genome60kDa inner-membrane protein3e-106386
NC_004757:427483:4421864421864440301845Nitrosomonas europaea ATCC 19718, complete genome60Kd inner membrane protein4e-106385
NC_007908:4677856:4709438470943847111531716Rhodoferax ferrireducens T118, complete genome60 kDa inner membrane insertion protein2e-104379
NC_019815:589762:6300926300926316841593Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneipreprotein translocase subunit YidC1e-100367
NC_015696:47484:6297762977646351659Francisella sp. TX077308 chromosome, complete genomeinner membrane protein translocase component YidC, long form1e-98360
NC_019814:125611:1681981681981698201623Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonaspreprotein translocase subunit YidC9e-95347
NC_020299:764526:8074608074608090791620Candidatus Kinetoplastibacterium oncopeltii TCC290E, completepreprotein translocase subunit YidC4e-92338
NC_002488:2657274:2676877267687726785741698Xylella fastidiosa 9a5c, complete genomeputative inner membrane protein translocase component YidC2e-91337
NC_004545:15650:1565015650172601611Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomehypothetical protein3e-91336
NC_010513:2452811:2472591247259124742881698Xylella fastidiosa M12 chromosome, complete genomeputative inner membrane protein translocase component YidC2e-90333
NC_004556:2495712:2517374251737425190711698Xylella fastidiosa Temecula1, complete genomeputative inner membrane protein translocase component YidC4e-90332
NC_010577:2513241:2533153253315325348501698Xylella fastidiosa M23, complete genome60 kDa inner membrane insertion protein4e-90332
NC_008576:4701930:4716781471678147184511671Magnetococcus sp. MC-1, complete genome60 kDa inner membrane insertion protein2e-82306
NC_007498:3655304:3663225366322536648531629Pelobacter carbinolicus DSM 2380, complete genomepredicted inner-membrane protein7e-72271
NC_011979:4293859:4302086430208643036781593Geobacter sp. FRC-32, complete genomeYidC translocase/secretase9e-68258
NC_009483:5113729:5133809513380951353951587Geobacter uraniireducens Rf4 chromosome, complete genome60 kDa inner membrane insertion protein3e-65249
NC_014935:1287494:1306946130694613085531608Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemembrane protein insertase, yidc/oxa1 family2e-64247
NC_019907:1411124:1433888143388814356481761Liberibacter crescens BT-1 chromosome, complete genomeInner membrane protein translocase component YidC, long form2e-55217
NC_020126:10319500:1034760310347603103494201818Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-40167
NC_011060:3000067:3015046301504630167971752Pelodictyon phaeoclathratiforme BU-1, complete genome60 kDa inner membrane insertion protein1e-39164
NC_002932:2142000:4268426860401773Chlorobium tepidum TLS, complete genomeOxa1/60 kDa IMP family protein6e-36152
NC_015436:1:5038503868521815Spirochaeta coccoides DSM 17374 chromosome, complete genomeMembrane protein oxaA6e-32139
NC_012225:1775264:1775264177526417771381875Brachyspira hyodysenteriae WA1, complete genomeputative inner membrane protein6e-32139
NC_017243:314000:3321443321443340151872Brachyspira intermedia PWS/A chromosome, complete genomeinner membrane protein5e-31136
NC_014221:398636:4156044156044172921689Truepera radiovictrix DSM 17093 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family3e-30133
NC_018607:1313035:1340506134050613423741869Brachyspira pilosicoli B2904 chromosome, complete genomeinner membrane protein2e-27124
NC_015519:2739347:275829827582982758927630Tepidanaerobacter sp. Re1 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family3e-27124
NC_015387:1002955:1020594102059410219431350Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family1e-26122
NC_014098:3372000:338303333830333383773741Bacillus tusciae DSM 2912 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family7e-27122
NC_019908:641321:6413216413216431291809Brachyspira pilosicoli P43/6/78 chromosome, complete genome60 kDa inner membrane insertion protein7e-27122
NC_014220:2398334:240389924038992404678780Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family6e-26119
NC_015565:2879603:289041528904152891104690Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completemembrane protein insertase, YidC/Oxa1 family5e-25116
NC_018750:3964784:3974808397480839761331326Streptomyces venezuelae ATCC 10712, complete genomeInner membrane protein translocase component YidC, long form9e-25115
NC_013929:5135285:5143088514308851443531266Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-24115
NC_016114:3655005:3681266368126636825221257Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeinsertase3e-24114
NC_003888:4251867:4274032427403242753271296Streptomyces coelicolor A3(2), complete genomeinner membrane protein translocase component YidC1e-24114
NC_015953:3684065:3694290369429036955611272Streptomyces sp. SirexAA-E chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family4e-24113
NC_016599:144844:1632541632541650411788Owenweeksia hongkongensis DSM 17368 chromosome, complete genomemembrane protein insertase7e-24112
NC_013192:2434664:246404924640492464735687Leptotrichia buccalis DSM 1135, complete genome60 kDa inner membrane insertion protein2e-23111
NC_013406:7092510:711315871131587114048891Paenibacillus sp. Y412MC10 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family2e-23110
NC_016935:8716704:873706787370678737798732Paenibacillus mucilaginosus 3016 chromosome, complete genome60 kDa inner membrane insertion protein2e-22107
NC_015690:8645500:866184086618408662571732Paenibacillus mucilaginosus KNP414 chromosome, complete genome60 kDa inner membrane insertion protein2e-22107
NC_013595:10329633:103392991033929910340249951Streptosporangium roseum DSM 43021, complete genomePreprotein translocase subunit YidC-like protein5e-22106
NC_014472:3785319:3801139380113938029981860Flavobacteriales bacterium HTCC2170 chromosome, complete genomeputative inner membrane protein translocase component YidC7e-22105
NC_014151:4106624:4120710412071041218641155Cellulomonas flavigena DSM 20109 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family8e-22105
NC_006177:3549467:356419035641903564939750Symbiobacterium thermophilum IAM 14863, complete genomeSpoIIIJ9e-22105
NC_014933:3015678:3019705301970530215521848Bacteroides helcogenes P 36-108 chromosome, complete genomeprotein translocase subunit yidC2e-21104
NC_014392:2513529:2525880252588025269051026Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family4e-21103
NC_014039:2479500:2493076249307624941551080Propionibacterium acnes SK137 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family2e-20100
NC_006085:2544421:2558011255801125590901080Propionibacterium acnes KPA171202, complete genomeputative inner membrane protein translocase component YidC2e-20100
NC_016511:2482500:2496368249636824974471080Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeputative inner membrane protein translocase component YidC2e-20100
NC_016512:2506898:2520488252048825215671080Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeputative inner membrane protein translocase component YidC2e-20100
NC_016516:2473500:2487225248722524883041080Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeputative inner membrane protein translocase component YidC2e-20100
NC_013522:736339:737961737961738767807Thermanaerovibrio acidaminovorans DSM 6589, complete genome60 kDa inner membrane insertion protein1e-1998.6
NC_007333:3626510:363971736397173640643927Thermobifida fusca YX, complete genomehypothetical protein3e-1997.1
NC_013204:3613824:362998836299883630773786Eggerthella lenta DSM 2243, complete genome60 kDa inner membrane insertion protein7e-1995.9
NC_015389:2101841:211394321139432114725783Coriobacterium glomerans PW2 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family7e-1995.9
NC_014033:1691822:1718150171815017199131764Prevotella ruminicola 23 chromosome, complete genomeinner-membrane protein, 60 kDa3e-1894
NC_014363:2035141:204956120495612050319759Olsenella uli DSM 7084 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family3e-1893.6
NC_014210:5752651:576548057654805766424945Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,membrane protein insertase, YidC/Oxa1 family6e-1892.8
NC_008578:2431074:244123624412362442183948Acidothermus cellulolyticus 11B, complete genome60 kDa inner membrane insertion protein8e-1892.4
NC_013521:4240468:4251053425105342521501098Sanguibacter keddieii DSM 10542, complete genomepreprotein translocase subunit YidC1e-1791.7
NC_006448:1604627:161855116185511619357807Streptococcus thermophilus LMG 18311, complete genomecytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ1e-1791.7
NC_006449:1606948:162086216208621621668807Streptococcus thermophilus CNRZ1066, complete genomehypothetical protein1e-1791.7
NC_017093:8757291:8771229877122987722481020Actinoplanes missouriensis 431, complete genomehypothetical protein3e-1790.9
NC_013165:3146000:316196231619623162735774Slackia heliotrinireducens DSM 20476, complete genomepreprotein translocase subunit YidC4e-1790.1
NC_015760:2009425:202505920250592025865807Streptococcus salivarius CCHSS3, complete genomepreprotein translocase subunit YidC6e-1789.4
NC_008593:2527064:109910991839741Clostridium novyi NT, complete genomeMembrane protein oxaA8e-1789
NC_007929:1805000:182523018252301826069840Lactobacillus salivarius subsp. salivarius UCC118, complete genome60 kDa inner membrane protein2e-1687.8
NC_004557:32094:538365383654498663Clostridium tetani E88, complete genomeputative inner membrane protein translocase component YidC2e-1687.8
NC_009616:1604276:1619039161903916203401302Thermosipho melanesiensis BI429 chromosome, complete genome60 kDa inner membrane insertion protein2e-1687.4
NC_014554:1339566:135333713533371354260924Lactobacillus plantarum subsp. plantarum ST-III chromosome,integral membrane protein7e-1582.8
NC_016938:1830500:184422518442251845052828Melissococcus plutonius DAT561 chromosome 1, complete genomeinner membrane protein translocase component YidC1e-1482
NC_015759:760671:779422779422780273852Weissella koreensis KACC 15510 chromosome, complete genomecell division protein1e-1481.6
NC_011898:4044500:406657540665754067420846Clostridium cellulolyticum H10, complete genome60 kDa inner membrane insertion protein4e-1480.1
NC_014550:3839389:385718538571853858159975Arthrobacter arilaitensis Re117, complete genomeputative preprotein translocase subunit YidC2e-1378.2
NC_008541:4679022:469651646965164697490975Arthrobacter sp. FB24 chromosome 1, complete sequence60 kDa inner membrane insertion protein2e-1377.8
NC_014498:1983740:198374019837401984570831Streptococcus pneumoniae 670-6B chromosome, complete genomemembrane protein OxaA 12e-1377.8
NC_015125:1597600:1605586160558616066621077Microbacterium testaceum StLB037, complete genomepreprotein translocase subunit YidC3e-1377
NC_014833:3667748:3681963368196336833601398Ruminococcus albus 7 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family5e-1376.6
NC_011886:4376261:439327843932784394252975Arthrobacter chlorophenolicus A6, complete genome60 kDa inner membrane insertion protein6e-1376.3
NC_018531:4718904:473412047341204735109990Arthrobacter sp. Rue61a chromosome, complete genomemembrane protein OxaA1e-1275.5
NC_008711:4579997:459521145952114596200990Arthrobacter aurescens TC1, complete genomeputative 60Kd inner membrane family protein1e-1275.5
NC_015564:4727630:4736452473645247375521101Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeputative OxaA family protein1e-1275.1
NC_015145:4232283:424836842483684249348981Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomepreprotein translocase subunit YidC2e-1274.3
NC_020207:843822:863279863279864229951Enterococcus faecium NRRL B-2354, complete genomeInner membrane protein translocase component YidC, OxaA protein2e-1274.3
NC_014830:4012999:4021918402191840230391122Intrasporangium calvum DSM 43043 chromosome, complete genomemembrane protein insertase, YidC/Oxa1 family4e-1273.6
NC_011565:190406:2092542092542110921839Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative inner membrane protein translocase component YidC4e-1273.6
NC_020134:2948000:297233829723382973270933Clostridium stercorarium subsp. stercorarium DSM 8532, completemembrane protein insertase, YidC/Oxa1 family5e-1273.2
NC_014169:2466442:2475885247588524768921008Bifidobacterium longum subsp. longum JDM301 chromosome, complete60 kDa inner membrane insertion protein6e-1272.8
NC_017218:2313245:2325405232540523264151011Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome60Kd inner membrane protein2e-1171.2
NC_017221:2268276:2274526227452622755331008Bifidobacterium longum subsp. longum KACC 91563 chromosome,preprotein translocase subunit2e-1170.9
NC_016582:8031000:804835980483598049081723Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1170.9
NC_010816:1660066:1668587166858716695941008Bifidobacterium longum DJO10A, complete genomePreprotein translocase subunit2e-1170.9
NC_004307:1620500:1626921162692116279281008Bifidobacterium longum NCC2705, complete genomeconserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family2e-1170.9
NC_002677:3253057:3265645326564532667871143Mycobacterium leprae TN, complete genomeputative inner membrane protein translocase component YidC2e-1170.9
NC_011896:3252925:3265513326551332666551143Mycobacterium leprae Br4923, complete genomehypothetical protein2e-1170.9
NC_016627:4871875:489578148957814896626846Clostridium clariflavum DSM 19732 chromosome, complete genomepreprotein translocase subunit YidC6e-1169.7
NC_021177:2766910:276956427695642770430867Streptomyces fulvissimus DSM 40593, complete genomeMembrane protein insertase, YidC/Oxa1 family6e-1169.7
NC_014656:1634397:1642919164291916439261008Bifidobacterium longum subsp. longum BBMN68 chromosome, completeyidc22e-1067.8
NC_017219:2815225:2826796282679628278031008Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-1067.4
NC_011593:2819230:2830795283079528318021008Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,60 kDa inner membrane insertion protein3e-1067.4
NC_015052:2383865:239815023981502399082933Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein3e-1067
NC_015067:2371428:238300223830022383919918Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein7e-1065.9
NC_003155:6295078:631403463140346314765732Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-0964.7
NC_014616:2172025:2184683218468321856931011Bifidobacterium bifidum S17 chromosome, complete genomepreprotein translocase subunit YidC2e-0964.7
NC_007164:2446879:245983524598352460809975Corynebacterium jeikeium K411, complete genomepreprotein translocase YidC subunit2e-0964.3
NC_018720:2138180:2164972216497221659941023Bifidobacterium asteroides PRL2011 chromosome, complete genome60 kDa inner membrane insertion protein2e-0964.3
NC_005303:272915:2772562772562788331578Onion yellows phytoplasma OY-M, complete genomepreprotein translocase subunit YidC4e-0963.5
NC_007716:467235:4983804983804999211542Aster yellows witches'-broom phytoplasma AYWB, complete genome60 kDa inner membrane protein2e-0860.8
NC_015738:978794:1028724102872410306341911Eggerthella sp. YY7918, complete genomepreprotein translocase subunit YidC3e-0860.5
NC_013161:4209554:4226049422604942271881140Cyanothece sp. PCC 8802, complete genome60 kDa inner membrane insertion protein7e-0859.3
NC_015578:1807428:1819105181910518218282724Treponema primitia ZAS-2 chromosome, complete genomeinner membrane protein5e-0756.6
NC_004369:2968251:2971356297135629725491194Corynebacterium efficiens YS-314, complete genomeputative inner membrane protein translocase component YidC4e-0653.5