Pre_GI: BLASTP Hits

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Query: NC_009512:469000:490208 Pseudomonas putida F1, complete genome

Start: 490208, End: 490423, Length: 216

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:796878:817853817853818068216Pseudomonas stutzeri A1501, complete genome30S ribosomal protein S213e-1994
NC_007645:6407370:640875064087506408965216Hahella chejuensis KCTC 2396, complete genomeribosomal protein S217e-1785.9
NC_007912:909112:930612930612930827216Saccharophagus degradans 2-40, complete genomeGlutamine amidotransferase of anthranilate synthase3e-1683.6
NC_008463:632869:651720651720651935216Pseudomonas aeruginosa UCBPP-PA14, complete genome30S ribosomal protein S213e-1580.5
NC_014837:3739408:374406437440643744279216Pantoea sp. At-9b chromosome, complete genome30S ribosomal protein S218e-1579
NC_008800:4013298:401694040169404017155216Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,30S ribosomal protein S218e-1579
NC_014618:690056:730392730392730607216Enterobacter cloacae SCF1 chromosome, complete genome30S ribosomal protein S218e-1579
NC_016816:674171:690325690325690540216Pantoea ananatis LMG 5342, complete genome30S ribosomal protein S218e-1579
NC_009831:1255995:127733712773371277552216Shewanella sediminis HAW-EB3, complete genomeribosomal protein S212e-1478.2
NC_013416:1429881:145192314519231452138216Aggregatibacter actinomycetemcomitans D11S-1, complete genome30S ribosomal protein S213e-1477.4
NC_016602:3122700:312490931249093125124216Vibrio furnissii NCTC 11218 chromosome 1, complete sequence30S ribosomal protein S213e-1477
NC_016445:2938887:296574529657452965960216Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete30S ribosomal protein S213e-1477
NC_012668:62500:654166541665631216Vibrio cholerae MJ-1236 chromosome 1, complete sequence30S ribosomal protein S213e-1477
NC_004545:15650:622236222362438216Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome30S ribosomal protein S215e-1476.6
NC_010939:1633000:164971916497191649934216Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete30S ribosomal protein S211e-1375.1
NC_009053:1668500:168595916859591686174216Actinobacillus pleuropneumoniae L20, complete genome30S ribosomal protein S211e-1375.1
NC_010278:1625695:164700916470091647224216Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,30S ribosomal protein S211e-1375.1
NC_011761:2067695:208739520873952087610216Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete30S ribosomal protein S212e-1374.7
NC_008260:2340824:234721123472112347426216Alcanivorax borkumensis SK2, complete genome30S ribosomal protein S211e-1271.6
NC_018677:111500:140574140574140879306Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeSSU ribosomal protein S21p2e-1167.8
NC_009465:171000:194838194838195053216Candidatus Vesicomyosocius okutanii HA, complete genome30S ribosomal protein S212e-1064.7
NC_012969:2476318:251326525132652513477213Methylovorus glucosetrophus SIP3-4 chromosome, complete genome30S ribosomal protein S215e-1063.2
NC_014733:2363838:238216023821602382372213Methylovorus sp. MP688 chromosome, complete genomeribosomal protein s215e-1063.2
NC_008786:3323167:334423033442303344442213Verminephrobacter eiseniae EF01-2, complete genomeribosomal protein S215e-1063.2
NC_014323:961825:961825961825962037213Herbaspirillum seropedicae SmR1 chromosome, complete genome30S ribosomal protein S219e-1062.4
NC_007947:2447635:248349324834932483705213Methylobacillus flagellatus KT, complete genomeribosomal protein S211e-0962
NC_012968:2228943:224798922479892248201213Methylotenera mobilis JLW8, complete genomeribosomal protein S211e-0962
NC_015856:1182974:120408112040811204293213Collimonas fungivorans Ter331 chromosome, complete genome30S ribosomal protein S21p2e-0961.2
NC_007650:722961:722961722961723173213Burkholderia thailandensis E264 chromosome II, complete sequenceribosomal protein S213e-0960.5
NC_006351:2398403:241195124119512412163213Burkholderia pseudomallei K96243 chromosome 2, complete sequence30S ribosomal protein S213e-0960.5
NC_007435:1077792:109446110944611094673213Burkholderia pseudomallei 1710b chromosome II, complete sequence30S ribosomal protein S213e-0960.5
NC_010805:530876:532172532172532384213Burkholderia multivorans ATCC 17616 chromosome 2, completesmall subunit ribosomal protein S213e-0960.5
NC_009075:2428248:244179724417972442009213Burkholderia pseudomallei 668 chromosome II, complete sequence30S ribosomal protein S213e-0960.5
NC_009078:2351046:236459023645902364802213Burkholderia pseudomallei 1106a chromosome II, complete sequence30S ribosomal protein S213e-0960.5
NC_009255:1071868:107319410731941073406213Burkholderia vietnamiensis G4 chromosome 2, complete sequence30S ribosomal protein S213e-0960.5
NC_009659:543000:543131543131543343213Janthinobacterium sp. Marseille chromosome, complete genome30S ribosomal protein S214e-0960.1
NC_010552:752007:753331753331753543213Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceribosomal protein S219e-0958.9
NC_002971:1523065:153869315386931538917225Coxiella burnetii RSA 493, complete genomeribosomal protein S214e-0856.6
NC_016627:3205333:324783032478303248006177Clostridium clariflavum DSM 19732 chromosome, complete genome30S ribosomal protein S215e-0856.6
NC_008593:1704207:170840217084021708584183Clostridium novyi NT, complete genomeribosomal protein S216e-0856.2
NC_013216:3408608:341352434135243413721198Desulfotomaculum acetoxidans DSM 771, complete genomeribosomal protein S211e-0755.1
NC_009633:3055413:307515830751583075331174Alkaliphilus metalliredigens QYMF chromosome, complete genome30S ribosomal protein S211e-0755.1
NC_008261:2524913:252915825291582529334177Clostridium perfringens ATCC 13124, complete genomeribosomal protein S212e-0754.3
NC_018515:4148037:415329541532954153471177Desulfosporosinus meridiei DSM 13257 chromosome, complete genome30S ribosomal protein S213e-0753.9
NC_021182:2192718:221217322121732212349177Clostridium pasteurianum BC1, complete genomeribosomal protein S214e-0753.5
NC_020291:1014333:102843110284311028607177Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome30S ribosomal protein S215e-0753.1
NC_014117:3375796:337579633757963376008213Burkholderia sp. CCGE1002 chromosome chromosome 1, completeribosomal protein S217e-0752.8
NC_014623:7331860:733358073335807333774195Stigmatella aurantiaca DW4/3-1 chromosome, complete genome30S ribosomal protein S211e-0652
NC_010520:3204480:320987532098753210051177Clostridium botulinum A3 str. Loch Maree, complete genomeribosomal protein S212e-0651.6
NC_012563:3374904:338029933802993380475177Clostridium botulinum A2 str. Kyoto, complete genomeribosomal protein S212e-0651.6
NC_010516:3196158:320155332015533201729177Clostridium botulinum B1 str. Okra, complete genomeribosomal protein S212e-0651.6
NC_009495:3138355:314374831437483143924177Clostridium botulinum A str. ATCC 3502 chromosome, complete genome30S ribosomal protein S212e-0651.6
NC_009697:3071198:307659130765913076767177Clostridium botulinum A str. ATCC 19397 chromosome, complete30S ribosomal protein S212e-0651.6
NC_009698:3006500:301351330135133013689177Clostridium botulinum A str. Hall chromosome, complete genome30S ribosomal protein S212e-0651.6
NC_009699:3178222:318409931840993184275177Clostridium botulinum F str. Langeland chromosome, complete genome30S ribosomal protein S212e-0651.6
NC_012658:3213498:321889332188933219069177Clostridium botulinum Ba4 str. 657 chromosome, complete genome30S ribosomal protein S212e-0651.6
NC_017297:3178378:318425531842553184431177Clostridium botulinum F str. 230613 chromosome, complete genome30S ribosomal protein S212e-0651.6
NC_019903:3048132:305311730531173053293177Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,30S ribosomal protein S212e-0651.2
NC_015185:792933:803318803318803542225Desulfurobacterium thermolithotrophum DSM 11699 chromosome,30S ribosomal protein S213e-0650.4
NC_013198:1538792:157125815712581571434177Lactobacillus rhamnosus GG, complete genomeribosomal protein S21 (30S ribosomal protein S21)4e-0650.4
NC_016012:879972:899432899432899641210Candidatus Arthromitus sp. SFB-rat-Yit, complete genome30S ribosomal protein S218e-0649.3