Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2192718 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
219271821944961779ComECRec2-related proteinQuickGO ontologyBLASTP
219462321956511029DNA polymerase III delta subunitQuickGO ontologyBLASTP
21957672196033267ribosomal protein S20QuickGO ontologyBLASTP
21963332197304972GPR endopeptidaseQuickGO ontologyBLASTP
219765321987621110stage II sporulation protein PQuickGO ontologyBLASTP
21988182199330513hypothetical proteinBLASTP
219955622013611806GTP-binding protein LepAQuickGO ontologyBLASTP
220136422025031140putative oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
220274622037861041heat shock gene repressor HrcAQuickGO ontologyBLASTP
22037982204457660molecular chaperone GrpE heat shock proteinQuickGO ontologyBLASTP
220452122063711851chaperone protein DnaKQuickGO ontologyBLASTP
220664322077881146chaperone protein DnaJQuickGO ontologyBLASTP
22079392208133195hypothetical protein
22084272209362936ribosomal protein L11 methyltransferaseQuickGO ontologyBLASTP
22093902210142753RNA methyltransferase RsmE familyQuickGO ontologyBLASTP
221014222114461305MiaB-like tRNA modifying enzymeQuickGO ontologyBLASTP
22116622211994333HIT family hydrolase diadenosine tetraphosphate hydrolaseQuickGO ontologyBLASTP
22121732212349177ribosomal protein S21QuickGO ontologyBLASTP
22123722212815444hypothetical proteinBLASTP
22129332213214282sporulation protein YqfCQuickGO ontologyBLASTP
221321622143581143sporulation protein YqfDQuickGO ontologyBLASTP
221440922164632055putative domain HDIG-containing proteinQuickGO ontologyBLASTP