Pre_GI: BLASTP Hits

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Query: NC_008390:2058500:2059577 Burkholderia cepacia AMMD chromosome 1, complete sequence

Start: 2059577, End: 2062084, Length: 2508

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012724:3100430:3107328310732831098292502Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein01298
NC_015381:3457784:347948334794833480445963Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein5e-130466
NC_015381:1173603:1192541119254111952732733Burkholderia gladioli BSR3 chromosome 1, complete sequencepyocin R2_PP, TraC domain-containing protein1e-128461
NC_004129:2201780:2215930221593022181672238Pseudomonas fluorescens Pf-5, complete genomeDNA primase domain protein3e-127456
NC_016830:5031819:5038640503864050408592220Pseudomonas fluorescens F113 chromosome, complete genomevirulence-associated e family protein9e-122438
NC_002947:3404000:3421840342184034240502211Pseudomonas putida KT2440, complete genomepyocin R2_PP, traC domain protein5e-119429
NC_017986:5509569:5526345552634555285552211Pseudomonas putida ND6 chromosome, complete genomeTraC domain-containing protein8e-119428
NC_004578:3849835:3854392385439238566112220Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA primase domain protein3e-116419
NC_011420:36272:3838538385409132529Rhodospirillum centenum SW, complete genomevirulence-associated protein E, putative3e-74280
NC_004463:5540924:5563519556351955647331215Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein7e-54213
NC_008095:1401919:1418714141871414213262613Myxococcus xanthus DK 1622, complete genomevirulence-associated protein E domain protein1e-52209
NC_020126:4084114:4102816410281641051162301Myxococcus stipitatus DSM 14675, complete genomevirulence-associated protein E domain-containing protein3e-51204
NC_002952:1592000:1618968161896816214152448Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein4e-50200
NC_007168:1839382:1841834184183418442812448Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-49199
NC_010079:1564327:1589034158903415914812448Staphylococcus aureus subsp. aureus USA300_TCH1516, completehypothetical bacteriophage protein7e-50199
NC_007793:1574456:1575087157508715775342448Staphylococcus aureus subsp. aureus USA300, complete genomevirulence-associated protein E7e-50199
NC_017338:1517723:1542429154242915448762448Staphylococcus aureus subsp. aureus JKD6159 chromosome, completevirulence-associated E family protein7e-50199
NC_017190:3166000:3168463316846331708772415Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein1e-49198
NC_017337:321155:3371193371193395662448Staphylococcus aureus subsp. aureus ED133 chromosome, completevirulence-associated protein E2e-49197
NC_014623:1074299:1107875110787511101812307Stigmatella aurantiaca DW4/3-1 chromosome, complete genomevirulence-associated protein e3e-49197
NC_017297:2531750:2556138255613825585612424Clostridium botulinum F str. 230613 chromosome, complete genomeputative virulence-associated protein E3e-49197
NC_009699:2552195:2555998255599825584212424Clostridium botulinum F str. Langeland chromosome, complete genomevirulence-associated protein E3e-49197
NC_011660:2541632:2567732256773225701702439Listeria monocytogenes HCC23 chromosome, complete genomevirulence-associated E family protein4e-49197
NC_012563:2680246:2683948268394826863712424Clostridium botulinum A2 str. Kyoto, complete genomevirulence-associated E domain protein5e-48193
NC_017179:1683199:1696029169602916984462418Clostridium difficile BI1, complete genomevirulence-associated protein e2e-47191
NC_013315:1679000:1688014168801416904312418Clostridium difficile CD196 chromosome, complete genomevirulence-associated protein e2e-47191
NC_009706:2673906:2728959272895927313252367Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein7e-47189
NC_009253:1265474:1272083127208312745392457Desulfotomaculum reducens MI-1 chromosome, complete genomevirulence-associated E family protein2e-46187
NC_014328:303063:3567403567403591032364Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage-like protein3e-46187
NC_021182:554000:5655985655985680182421Clostridium pasteurianum BC1, complete genomeputative P-loop ATPase3e-46187
NC_011898:3367457:3402258340225834046242367Clostridium cellulolyticum H10, complete genomevirulence-associated E family protein7e-46186
NC_003909:386880:4009774009774033432367Bacillus cereus ATCC 10987, complete genomevirulence-associated protein E7e-46186
NC_014219:3254268:3254268325426832566912424Bacillus selenitireducens MLS10 chromosome, complete genomevirulence-associated E family protein2e-44181
NC_015519:2526047:2529737252973725321422406Tepidanaerobacter sp. Re1 chromosome, complete genomevirulence-associated E family protein2e-43178
NC_015520:2974048:2996411299641129987982388Mahella australiensis 50-1 BON chromosome, complete genomevirulence-associated E family protein2e-43177
NC_004668:295417:3020153020153044532439Enterococcus faecalis V583, complete genomehypothetical protein3e-43177
NC_014393:937000:9445859445859469572373Clostridium cellulovorans 743B chromosome, complete genomevirulence-associated E family protein4e-43177
NC_010320:1268355:1278305127830512806502346Thermoanaerobacter sp. X514 chromosome, complete genomevirulence-associated E family protein3e-42174
NC_016633:3069518:3106570310657031090082439Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative P-loop ATPase3e-41171
NC_017341:903473:9104009104009118571458Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,pathogenicity island protein1e-40169
NC_017347:2119000:2128469212846921299261458Staphylococcus aureus subsp. aureus T0131 chromosome, completePathogenicity island protein1e-40169
NC_014923:3968000:3977192397719239786101419Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completevirulence-associated E family protein1e-40168
NC_013517:1480368:1491811149181114942312421Sebaldella termitidis ATCC 33386, complete genomevirulence-associated E family protein2e-39164
NC_010337:2848360:2888069288806928904562388Heliobacterium modesticaldum Ice1, complete genomevirulence-associated protein e, putative9e-39162
NC_015976:1893076:1921264192126419237532490Sphingobium sp. SYK-6, complete genomehypothetical protein2e-38161
NC_017317:1291294:1305808130580813082672460Corynebacterium ulcerans 809 chromosome, complete genomevirulence-associated E family protein2e-38161
NC_015683:1296000:1309435130943513118942460Corynebacterium ulcerans BR-AD22 chromosome, complete genomevirulence-associated E family protein8e-38159
NC_005125:4093352:4095492409549240980112520Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-37158
NC_015913:117966:1248621248621273642503Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome3e-37157
NC_017294:115500:1241791241791266742496Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomevirulence-associated E family protein8e-37156
NC_009633:4097536:4132929413292941352772349Alkaliphilus metalliredigens QYMF chromosome, complete genomevirulence-associated E family protein8e-35149
NC_013316:2033906:2084201208420120855291329Clostridium difficile R20291, complete genomehypothetical protein8e-34146
NC_013941:3182576:3187690318769031898762187Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP-loop ATPase-like protein8e-34146
NC_012781:2552723:2576194257619425775221329Eubacterium rectale ATCC 33656, complete genomehypothetical protein1e-33145
NC_012781:700226:7212377212377225651329Eubacterium rectale ATCC 33656, complete genomehypothetical protein1e-33145
NC_014219:830966:8534298534298557802352Bacillus selenitireducens MLS10 chromosome, complete genomevirulence-associated E family protein4e-33144
NC_013316:2033906:2064800206480020661581359Clostridium difficile R20291, complete genomehypothetical protein6e-33143
NC_005070:1088808:1092275109227510943412067Synechococcus sp. WH 8102, complete genomehypothetical protein1e-30135
NC_009485:5171658:5180072518007251822822211Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein7e-30133
NC_007413:3168931:3176621317662131787142094Anabaena variabilis ATCC 29413, complete genomeVirulence-associated E4e-28127
NC_011296:281930:2861472861472873611215Thermodesulfovibrio yellowstonii DSM 11347, complete genomepyocin R2_PP, TraC domain protein2e-27124
NC_015856:3912195:3940210394021039427262517Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein2e-25118
NC_010628:7493599:7499132749913275014172286Nostoc punctiforme PCC 73102, complete genomevirulence-associated E family protein1e-24115
NC_012984:520000:5261575261575274311275Lactobacillus plantarum JDM1, complete genomeprophage Lp3 protein 8, helicase1e-24115
NC_011001:2085986:2094115209411520955031389Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein6e-24113
NC_014752:131994:1422961422961441431848Neisseria lactamica ST-640, complete genomehypothetical protein2e-23111
NC_017506:2089769:209501420950142095910897Marinobacter adhaerens HP15 chromosome, complete genomevirulence-associated E family protein6e-23110
NC_014655:1098428:1106577110657711087512175Leadbetterella byssophila DSM 17132 chromosome, complete genomevirulence-associated e family protein6e-22106
NC_007513:1388641:1393386139338613945881203Synechococcus sp. CC9902, complete genomeP-loop ATPase and inactivated derivatives-like1e-21105
NC_016048:4047922:4065621406562140679632343Oscillibacter valericigenes Sjm18-20, complete genomevirulence-associated E family protein2e-21105
NC_012471:781063:7934387934387948381401Streptococcus equi subsp. equi 4047, complete genomephage protein5e-20100
NC_017033:2081206:210437521043752105307933Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein5e-1997.1
NC_007516:891681:907360907360907800441Synechococcus sp. CC9605, complete genome3e-1790.9
NC_016610:726128:7396707396707408751206Tannerella forsythia ATCC 43037 chromosome, complete genomeVirulence-associated protein E1e-1586.3
NC_010729:1014957:1026608102660810278131206Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein4e-1584.3
NC_019960:1658657:1736006173600617373071302Prevotella dentalis DSM 3688 chromosome 1, complete sequenceputative P-loop ATPase6e-1583.6
NC_009434:1580205:159532015953201596195876Pseudomonas stutzeri A1501, complete genomeTOPRIM domain-containing protein1e-1482.4
NC_003295:2669480:2689399268939926919452547Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-1481.3
NC_016776:4115889:4127533412753341296922160Bacteroides fragilis 638R, complete genomehypothetical protein5e-1480.5
NC_004757:267165:267165267165268085921Nitrosomonas europaea ATCC 19718, complete genomeToprim domain7e-1480.1
NC_019960:1126000:1133465113346511346551191Prevotella dentalis DSM 3688 chromosome 1, complete sequenceputative P-loop ATPase9e-1479.7
NC_013722:218847:2332592332592357272469Xanthomonas albilineans, complete genomehypothetical protein7e-1479.7
NC_015311:2626850:2659600265960026610361437Prevotella denticola F0289 chromosome, complete genomeVirulence-associated protein E2e-1378.6
NC_020054:1666263:1680500168050016817261227Fibrella aestuarina BUZ 2 drat genomehypothetical protein3e-1377.8
NC_014664:1614568:1614568161456816171172550Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein3e-1377.8
NC_005070:334952:3501023501023520721971Synechococcus sp. WH 8102, complete genomehypothetical protein4e-1274.3
NC_014500:2019113:2039592203959220423602769Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC8e-1273.2
NC_007650:2429307:2455275245527524581422868Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase3e-1068.2
NC_013592:2703327:2707294270729427099932700Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF9275e-1067
NC_012751:942315:9547339547339572192487Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA primase TraC2e-0965.1
NC_013892:3278647:3281299328129932824681170Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase (fragment)3e-0964.7
NC_013892:671000:6938526938526965482697Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase3e-0964.7
NC_013892:1272448:1299079129907913018532775Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase4e-0964.3
NC_013730:3956457:3966105396610539683512247Spirosoma linguale DSM 74, complete genomeP-loop ATPase and inactivated derivatives-like protein1e-0862.8
NC_015136:2021799:2045288204528820481372850Burkholderia sp. CCGE1001 chromosome 1, complete sequenceToprim sub domain-containing protein1e-0862.8
NC_013730:6471484:6495471649547164977202250Spirosoma linguale DSM 74, complete genomeP-loop ATPase and inactivated derivatives-like protein2e-0862
NC_007516:891681:898829898829899485657Synechococcus sp. CC9605, complete genomehypothetical protein3e-0861.2
NC_014033:675626:6786476786476798581212Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-0860.8
NC_006351:520500:5228525228525257192868Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein4e-0860.8
NC_004632:28470:4292242922475954674Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,DNA primase TraC5e-0860.8
NC_013222:3098409:3119734311973431219982265Robiginitalea biformata HTCC2501, complete genomehypothetical protein5e-0860.5
NC_015311:2059879:2103009210300921042531245Prevotella denticola F0289 chromosome, complete genomehypothetical protein5e-0860.5
NC_009074:94000:9434694346971982853Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein6e-0860.1
NC_018704:1424728:1429086142908614309091824Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein1e-0758.9
NC_009615:1734752:1764735176473517668912157Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein1e-0758.9
NC_012912:4194821:4195622419562241976672046Dickeya zeae Ech1591, complete genomeP4 alpha zinc-binding domain protein1e-0758.9
NC_014500:443874:4601454601454621902046Dickeya dadantii 3937 chromosome, complete genomeDNA primase2e-0758.2
NC_020211:996497:1011327101132710136752349Serratia marcescens WW4, complete genomephage/plasmid primase, P4 family3e-0757.8
NC_014500:3744705:3757707375770737603432637Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC3e-0757.8
NC_012880:4117376:4117865411786541199102046Dickeya dadantii Ech703, complete genomeP4 alpha zinc-binding domain protein5e-0757.4
NC_012880:2778795:2782217278221727848532637Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9278e-0756.6
NC_013941:338121:3604753604753628652391Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAlpha replication protein of prophage CP-933I1e-0656.2
NC_002695:301939:3195583195583218912334Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA primase1e-0655.8
NC_011353:305820:3234383234383257712334Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoside triphosphatase, D5 family1e-0655.8
NC_013008:306953:3247503247503270832334Escherichia coli O157:H7 str. TW14359 chromosome, complete genomealpha replication protein of prophage CP-933I1e-0655.8
NC_002655:301940:3195023195023218922391Escherichia coli O157:H7 EDL933, complete genomealpha replication protein of prophage CP-933I1e-0655.8
NC_013592:4295449:4298421429842143004662046Dickeya dadantii Ech586, complete genomeP4 alpha zinc-binding domain protein2e-0655.5
NC_009076:106807:1102561102561131082853Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-0655.1
NC_013508:3593000:3604038360403836063652328Edwardsiella tarda EIB202, complete genomehypothetical protein4e-0654.3
NC_012796:1600600:1627250162725016291331884Desulfovibrio magneticus RS-1, complete genomehypothetical protein5e-0653.9
NC_010508:2776283:2778117277811727809782862Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePrimase 26e-0653.9
NC_009778:567000:5928395928395951542316Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-0653.5
NC_015224:3291736:3306358330635833090422685Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Zinc-binding domain of primase-helicase family7e-0653.5
NC_007434:1322500:1346373134637313492342862Burkholderia pseudomallei 1710b chromosome I, complete sequenceinner membrane protein6e-0653.5
NC_008542:2631138:2632749263274926356252877Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceinner membrane protein6e-0653.5
NC_008060:1945597:1947208194720819500842877Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceinner membrane protein6e-0653.5
NC_011080:2870428:2886088288608828884212334Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase8e-0653.1
NC_009256:458649:4586494586494615252877Burkholderia vietnamiensis G4 chromosome 1, complete sequenceinner membrane protein8e-0653.1