Pre_GI Gene

Some Help

Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:3182576 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
318257631841981623hypothetical proteinBLASTP
31842013184773573phage terminase small subunitQuickGO ontologyBLASTP
31848353185359525hypothetical proteinBLASTP
31853433185819477LysozymeQuickGO ontologyBLASTP
31858233186164342phage holin lambda familyQuickGO ontologyBLASTP
31866103186774165hypothetical protein
31869833187405423transcriptional regulatorQuickGO ontologyBLASTP
318769031898762187P-loop ATPase-like proteinQuickGO ontologyBLASTP
31901623190836675hypothetical proteinBLASTP
31914703191619150hypothetical protein
31916163192518903hypothetical protein
319252131938221302Bbp38QuickGO ontologyBLASTP
31938383194386549hypothetical proteinBLASTP
31944393195068630hypothetical proteinBLASTP
319511531971782064DNA polymerase I - 3-5 exonuclease and polymerase domainsQuickGO ontologyBLASTP
31977793198330552hypothetical protein
31983733198642270phage associated proteinQuickGO ontologyBLASTP
31986483199358711hypothetical protein
319939732007881392Superfamily II DNARNA helicases SNF2 familyQuickGO ontologyBLASTP
32007853200985201hypothetical protein
320098232023791398IntegraseQuickGO ontologyBLASTP
32025943202854261hypothetical proteinBLASTP
32031253203277153hypothetical protein
32035503203930381Holo-ACP synthaseQuickGO ontologyBLASTP
32039303204661732Pyridoxine 5-phosphate synthaseQuickGO ontologyBLASTP
32046733205401729DNA repair protein recOQuickGO ontologyBLASTP
32054133206318906GTP-binding protein eraQuickGO ontologyBLASTP
32063153206995681ribonuclease 3QuickGO ontologyBLASTP