Pre_GI: BLASTP Hits

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Query: NC_007964:328825:360182 Nitrobacter hamburgensis X14, complete genome

Start: 360182, End: 361186, Length: 1005

Host Lineage: Nitrobacter hamburgensis; Nitrobacter; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrobacter hamburgensis X14 was isolated from soil. Nitrite-oxidizing soil bacterium. Members of this genus are found in marine, freshwater, and terrestrial habitats, often in association with ammonia-oxidizing bacteria. These organisms oxidize nitrite, generated by the oxidation of ammonia, to nitrate and play an important role in the global nitrogen cycle. The enzyme involved in nitrite oxidation, nitrite oxidoreductase, can also reduce nitrate to nitrite in the absence of oxygen, allowing Nitrobacter sp. to grow anaerobically. Nitrobacter hamburgensis is commonly isolated from freshwater, soil, and sewage sludge. This organism has been used in biofilms to remove nitrogen from wastewater.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011958:976500:100118410011841002065882Rhodobacter sphaeroides KD131 chromosome 2, complete genomeExonuclease9e-48190
NC_015275:911999:916822916822917739918Clostridium lentocellum DSM 5427 chromosome, complete genomeExonuclease RNase T and DNA polymerase III1e-30133
NC_014655:130636:153481153481154392912Leadbetterella byssophila DSM 17132 chromosome, complete genomeexonuclease rnase t and DNA polymerase iii2e-27123
NC_020911:1859210:186344118634411864049609Octadecabacter antarcticus 307, complete genomeputative exonuclease9e-25114
NC_014727:2036340:205057920505792051475897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii polc-type4e-24112
NC_011958:976500:9828219828219844371617Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein3e-21102
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit9e-1684.7
NC_014151:2312000:2313921231392123158161896Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, epsilon subunit1e-1377.8
NC_007681:153476:1579261579261592631338Methanosphaera stadtmanae DSM 3091, complete genomepredicted 3'-5' exonuclease1e-1377.4
NC_011898:513835:5162685162685205694302Clostridium cellulolyticum H10, complete genomeDNA polymerase III, alpha subunit2e-1377
NC_015671:1540860:1558211155821115600791869Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA polymerase III subunit epsilon3e-1376.3
NC_015588:1965787:1967662196766219693981737Isoptericola variabilis 225 chromosome, complete genomeDNA polymerase III, epsilon subunit5e-1375.5
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain1e-1273.9
UCMB5137:2128500:215436821543682154994627Bacillus atrophaeus UCMB-5137DNA polymerase III subunit epsilon3e-1272.8
NC_014639:2169277:219056321905632191189627Bacillus atrophaeus 1942 chromosome, complete genomeDNA polymerase III subunit epsilon3e-1272.8
CP002207:2169277:219056321905632191189627Bacillus atrophaeus 1942, complete genomeDNA polymerase III subunit epsilon3e-1272.8
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon4e-1272.4
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family1e-1170.9
NC_016610:2605922:262806726280672628558492Tannerella forsythia ATCC 43037 chromosome, complete genomeexonuclease1e-1067.4
NC_012121:897866:9022149022149065274314Staphylococcus carnosus subsp. carnosus TM300, complete genomehomolog of DNA polymerase III, alpha subunit3e-1066.6
NC_014033:3462437:346957734695773470068492Prevotella ruminicola 23 chromosome, complete genomeexonuclease6e-1065.1
NC_009664:3718927:3738654373865437404591806Kineococcus radiotolerans SRS30216, complete genomeDNA polymerase III, epsilon subunit8e-1065.1
NC_014103:3985897:4000185400018540044954311Bacillus megaterium DSM319 chromosome, complete genomeDNA polymerase III subunit alpha1e-0964.3
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-0963.9
NC_019968:1084288:108836410883641088855492Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA polymerase III epsilon subunit-like 3'-5' exonuclease2e-0963.9
NC_017353:1699652:1711348171134817156644317Staphylococcus lugdunensis N920143, complete genomeDNA polymerase III PolC-type4e-0962.4
NC_017294:758992:7723037723037764964194Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA polymerase III PolC5e-0962
NC_007622:1214629:1218890121889012232064317Staphylococcus aureus RF122, complete genomeDNA polymerase III6e-0962
NC_004461:921364:9423929423929467204329Staphylococcus epidermidis ATCC 12228, complete genomeDNA polymerase III, alpha chain PolC-type8e-0961.6
NC_002952:1291444:1295705129570513000214317Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III PolC-type8e-0961.6
NC_009782:1327340:1331601133160113359174317Staphylococcus aureus subsp. aureus Mu3, complete genomeDNA polymerase III alpha chain PolC-type8e-0961.6
NC_017341:1291583:1295844129584413001604317Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,DNA polymerase III subunit alpha8e-0961.6
NC_017338:1234077:1236038123603812403544317Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA polymerase III subunit alpha7e-0961.6
NC_020302:744956:768229768229768939711Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein1e-0861.2
NC_013192:519600:5301375301375345164380Leptotrichia buccalis DSM 1135, complete genomeDNA polymerase III, alpha subunit1e-0861.2
NC_009613:1337536:138110613811061381588483Flavobacterium psychrophilum JIP02/86, complete genomeDNA polymerase III, epsilon subunit1e-0861.2
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-0860.8
NC_013515:347671:3919693919693963664398Streptobacillus moniliformis DSM 12112, complete genomeDNA polymerase III, alpha subunit2e-0860.5
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit3e-0859.7
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha3e-0859.7
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type3e-0859.7
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit4e-0859.3
NC_007350:1551457:1558499155849915628154317Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA polymerase III alpha chain PolC-type4e-0859.3
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC4e-0859.3
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha3e-0859.3
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha3e-0859.3
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha3e-0859.3
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha3e-0859.3
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha3e-0859.3
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC3e-0859.3
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC3e-0859.3
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC3e-0859.3
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC5e-0858.9
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC5e-0858.9
NC_016887:1949927:197348819734881974084597Nocardia cyriacigeorgica GUH-2, complete genomeDNA polymerase III epsilon subunit and related 3'-5' exonucleases5e-0858.9
NC_008258:1873805:189061318906131891275663Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-0858.9
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha5e-0858.9
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha5e-0858.9
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc5e-0858.9
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type4e-0858.9
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha4e-0858.9
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC4e-0858.9
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC4e-0858.9
NC_015760:61345:7446974469788634395Streptococcus salivarius CCHSS3, complete genomeDNA polymerase III polC-type (PolIII)8e-0858.2
NC_006448:59654:7279172791771854395Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase III subunit alpha1e-0757.8
NC_006449:58436:7157471574759684395Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase III subunit alpha1e-0757.8
NC_016616:2112211:211411821141182114831714Dechlorosoma suillum PS chromosome, complete genomeDNA polymerase III epsilon subunit-like 3'-5' exonuclease1e-0757.4
NC_012563:2721658:2727878272787827321764299Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-0757
NC_005945:1459357:1473943147394314767472805Bacillus anthracis str. Sterne, complete genomeATP-dependent DNA helicase2e-0757
NC_007530:1459412:1473989147398914767932805Bacillus anthracis str. 'Ames Ancestor', complete genomeATP-dependent DNA helicase2e-0757
NC_010516:2511035:2541591254159125458894299Clostridium botulinum B1 str. Okra, complete genomeDNA polymerase III, alpha subunit, Gram-positive type4e-0755.8
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha6e-0755.5
NC_012438:1514376:152834415283441528961618Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA polymerase III PolC-type (PolIII)5e-0755.5
NC_009495:2524000:2553368255336825576664299Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III PolC5e-0755.5
NC_009697:2394826:2425391242539124296894299Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III PolC5e-0755.5
NC_009698:2367171:2397736239773624020344299Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III PolC5e-0755.5
NC_021182:4829000:4832933483293348372764344Clostridium pasteurianum BC1, complete genomeDNA polymerase III, alpha chain5e-0755.5
NC_012658:2584355:2611499261149926157974299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III PolC8e-0755.1
NS_000191:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17, completeDNA polymerase III epsilon subunit1e-0654.7
NC_020419:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeDNA polymerase III epsilon subunit1e-0654.7
NC_014311:1545175:154795115479511548679729Ralstonia solanacearum PSI07 chromosome, complete genomeDNA polymerase III epsilon subunit1e-0654.3
NC_010520:2585014:2616121261612126204194299Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-0653.9
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type7e-0651.6
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type7e-0651.6