Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:911999 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9126599145391881hypothetical proteinBLASTP
9149009160301131integrase family proteinQuickGO ontologyBLASTP
916199916744546hypothetical protein
916822917739918Exonuclease RNase T and DNA polymerase IIIQuickGO ontologyBLASTP
917798918166369helix-turn-helix domain proteinQuickGO ontologyBLASTP
918293918457165hypothetical protein
918460918768309hypothetical protein
918781918987207hypothetical proteinBLASTP
919000919170171hypothetical protein
919264919398135hypothetical protein
919395919607213hypothetical protein
919795920520726hypothetical proteinBLASTP
920532920696165hypothetical protein
920671921270600hypothetical protein
921267921653387VRR-NUC domain-containing proteinQuickGO ontologyBLASTP
921658922443786Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
922453923409957ParB domain protein nucleaseQuickGO ontologyBLASTP
923521924198678hypothetical proteinBLASTP
9246639261831521C-5 cytosine-specific DNA methylaseQuickGO ontologyBLASTP
926238926522285hypothetical protein
926684926977294hypothetical protein
927103927270168hypothetical protein
927307927591285hypothetical protein
927620927967348ASCH domain proteinQuickGO ontologyBLASTP
927979928527549Sigma-70 region 4 type 2QuickGO ontologyBLASTP
928655929023369HNH endonucleaseQuickGO ontologyBLASTP
929101929496396phage terminase small subunitQuickGO ontologyBLASTP
9294779312071731TerminaseQuickGO ontologyBLASTP
9312119324161206phage portal protein HK97 familyQuickGO ontologyBLASTP
932409932999591phage prohead protease HK97 familyQuickGO ontologyBLASTP
9329819343841404phage major capsid protein HK97 familyQuickGO ontologyBLASTP