Pre_GI: BLASTP Hits

Some Help

Query: NC_007952:1934249:1938755 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1938755, End: 1939432, Length: 678

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1124298:114726911472691147931663Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemultiple antibiotic resistance (MarC)-related protein6e-64243
NC_017223:2618535:263327226332722633931660Bordetella pertussis CS chromosome, complete genomemembrane efflux protein1e-63243
NC_002927:4130697:414644041464404147099660Bordetella bronchiseptica RB50, complete genomepossible membrane efflux protein1e-63243
NC_002929:2589202:260863626086362609295660Bordetella pertussis Tohama I, complete genomepossible membrane efflux protein1e-63243
NC_002928:3715492:373109237310923731832741Bordetella parapertussis 12822, complete genomepossible membrane efflux protein1e-62239
NC_009937:1733196:175142217514221752105684Azorhizobium caulinodans ORS 571, complete genomemultiple antibiotic resistance (MarC)-related protein1e-30132
NC_015856:633353:649587649587650264678Collimonas fungivorans Ter331 chromosome, complete genomeputative multiple antibiotic resistance protein MarC8e-29127
NC_013421:1173051:119772411977241198398675Pectobacterium wasabiae WPP163, complete genomemultiple antibiotic resistance (MarC)-related protein4e-1788.2
NC_009381:775357:805811805811806494684Yersinia pestis Pestoides F chromosome, complete genomemultiple drug resistance protein MarC6e-1787.4
NC_015061:2867027:287291128729112873555645Rahnella sp. Y9602 chromosome, complete genomemultiple antibiotic resistance (MarC)-related protein4e-1685.1
NC_016816:3974895:399292939929293993597669Pantoea ananatis LMG 5342, complete genomemultiple drug resistance protein MarC3e-1685.1
NC_013956:595320:600692600692601360669Pantoea ananatis LMG 20103 chromosome, complete genomeMarC3e-1685.1
NC_016514:2647984:265585526558552656502648Enterobacter cloacae EcWSU1 chromosome, complete genomemembrane protein YhcE5e-1684.3
NC_014306:2703544:271056027105602711207648Erwinia billingiae Eb661, complete genomeMultiple antibiotic resistance (MarC)-related protein6e-1684.3
NC_010498:1615980:163022516302251630890666Escherichia coli SMS-3-5, complete genomemultiple antibiotic resistance protein MarC3e-1582
NC_008563:1651270:165618416561841656849666Escherichia coli APEC O1, complete genomeMultiple antibiotic resistance protein MarC4e-1581.6
NC_006155:2461262:248163024816302482274645Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-1581.3
NC_010634:2376245:239813523981352398779645Yersinia pseudotuberculosis PB1/+, complete genomemultiple antibiotic resistance (MarC)-related protein5e-1581.3
NC_010465:2282874:229946722994672300111645Yersinia pseudotuberculosis YPIII, complete genomemultiple antibiotic resistance (MarC)-related protein5e-1581.3
NC_009708:2245586:226218122621812262825645Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-1581.3
NC_009832:2969376:297744729774472978091645Serratia proteamaculans 568, complete genomemultiple antibiotic resistance (MarC)-related protein5e-1581.3
NC_008149:1842500:186471018647101865354645Yersinia pestis Nepal516, complete genomemembrane protein6e-1580.9
NC_010159:2252380:226331822633182263962645Yersinia pestis Angola, complete genomehypothetical protein6e-1580.9
NC_003143:2433190:245608724560872456731645Yersinia pestis CO92, complete genomehypothetical protein6e-1580.9
NC_008150:1705152:172804917280491728693645Yersinia pestis Antiqua, complete genomehypothetical protein6e-1580.9
NC_004088:2227278:223232222323222232966645Yersinia pestis KIM, complete genomechannel protein6e-1580.9
NC_005810:2180303:220195522019552202599645Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-1580.9
NC_009381:1064227:108013810801381080782645Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-1580.9
NC_014029:2138000:215677321567732157417645Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-1580.9
NC_017154:2430093:245298824529882453632645Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-1580.9
NC_017160:2054289:208436520843652085009645Yersinia pestis D182038 chromosome, complete genomehypothetical protein6e-1580.9
NC_017168:3290380:330566233056623306306645Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-1580.9
NC_017265:1765399:177122217712221771866645Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-1580.9
NC_020211:996497:102133310213331021974642Serratia marcescens WW4, complete genomemultiple antibiotic resistance protein MarC9e-1580.5
CP002185:1727493:173093117309311731596666Escherichia coli W, complete genomeconserved protein7e-1580.5
CP002516:2361628:237425923742592374924666Escherichia coli KO11, complete genomemultiple antibiotic resistance (MarC)-related protein7e-1580.5
CU928160:1625535:162897316289731629638666Escherichia coli IAI1 chromosome, complete genomeputative wide-spectrum exporter7e-1580.5
NC_011415:1715644:171908217190821719747666Escherichia coli SE11 chromosome, complete genomemultiple drug resistance protein MarC7e-1580.5
NC_011741:1625535:162897316289731629638666Escherichia coli IAI1 chromosome, complete genomemultiple drug resistance protein MarC7e-1580.5
NC_016902:2361628:237425923742592374924666Escherichia coli KO11FL chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein7e-1580.5
NC_009800:1632585:163506516350651635730666Escherichia coli HS, complete genomemultiple antibiotic resistance protein MarC1e-1480.1
NC_014618:2423661:242675224267522427420669Enterobacter cloacae SCF1 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein1e-1479.7
NC_015968:2583721:259136725913672592014648Enterobacter asburiae LF7a chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein2e-1479.3
NC_009778:1477841:148925114892511489889639Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1479
NC_020260:1535394:154815615481561548794639Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-1479
NC_010067:1414000:141717014171701417835666Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1479
NC_013850:2103469:211302821130282113675648Klebsiella variicola At-22 chromosome, complete genomemultiple antibiotic resistance (MarC)-related protein6e-1477.8
NC_007384:2007467:203584520358452036492648Shigella sonnei Ss046, complete genomeputative channel protein7e-1477.4
NC_009654:3316458:333203433320343332651618Marinomonas sp. MWYL1, complete genomemultiple antibiotic resistance (MarC)-related protein8e-1477
NC_006624:1448165:145273214527321453382651Thermococcus kodakarensis KOD1, complete genomesmall neutral amino acid transporter3e-1375.1
NC_009438:2058566:206149620614962062128633Shewanella putrefaciens CN-32 chromosome, complete genomehypothetical protein6e-1374.3
NC_008322:2077628:207762820776282078260633Shewanella sp. MR-7, complete genomemultiple antibiotic resistance (MarC)-related proteins1e-1273.6
NC_007498:197810:202655202655203287633Pelobacter carbinolicus DSM 2380, complete genomeconserved hypothetical protein TIGR004271e-1273.6
NC_008577:2115440:211544021154402116072633Shewanella sp. ANA-3 chromosome 1, complete sequencemultiple antibiotic resistance (MarC)-related proteins9e-1373.6
NC_008321:1993541:199645919964591997091633Shewanella sp. MR-4, complete genomemultiple antibiotic resistance (MarC)-related proteins9e-1373.6
NC_011663:2813033:282844728284472829079633Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-1170.5
NC_011146:482440:504333504333504992660Geobacter bemidjiensis Bem, complete genomemultiple antibiotic resistance (MarC)-related protein1e-1169.7
NC_008525:606986:610660610660611283624Pediococcus pentosaceus ATCC 25745, complete genomeMultiple antibiotic transporter2e-1065.9
NC_007912:3921308:392279439227943923417624Saccharophagus degradans 2-40, complete genomeMCP methyltransferase, CheR-type2e-1065.5
NC_002689:46243:653356533565973639Thermoplasma volcanium GSS1, complete genomeIntegral membrane protein (MarC family)6e-1064.3
NC_014121:1653385:166307116630711663619549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-0961.2
NC_014758:1387470:139748713974871398074588Calditerrivibrio nitroreducens DSM 19672 chromosome, completemultiple antibiotic resistance (marc)-related protein8e-0960.8
NC_013926:614206:615458615458616072615Aciduliprofundum boonei T469 chromosome, complete genomemultiple antibiotic resistance (MarC)-related protein7e-0960.8
NC_014961:490551:507318507318507929612Desulfurococcus mucosus DSM 2162 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein1e-0860.1
NC_018507:339000:342832342832343476645Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomemultiple antibiotic transporter2e-0859.3
NC_018677:329829:336249336249336893645Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeMultiple antibiotic resistance protein MarC2e-0859.3
NC_008609:1394377:140972414097241410332609Pelobacter propionicus DSM 2379, complete genomemultiple antibiotic resistance (MarC)-related proteins1e-0756.6
NC_017093:2357583:236915423691542369795642Actinoplanes missouriensis 431, complete genomeputative membrane efflux protein4e-0755.1
NC_015416:1679188:170997017099701710617648Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein8e-0753.9
NC_008818:1244612:127110012711001271717618Hyperthermus butylicus DSM 5456, complete genomepredicted transporter protein2e-0652.8