Pre_GI: BLASTP Hits

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Query: NC_007907:2249607:2250883 Desulfitobacterium hafniense Y51, complete genome

Start: 2250883, End: 2251608, Length: 726

Host Lineage: Desulfitobacterium hafniense; Desulfitobacterium; Peptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from soil contaminated with tetrachloroethene (PCE) in Japan. It can efficiently dehalogenate PCEs via trichloroethene (TCE) to cis-1,2-dichloroethene (cis-1,2-DCE). It can also dehalogenase tetra-, penta-, and hexachloroethanes. Hydrocarbon dehalogenator. This organism can dehalogenate a variety of hydrocarbons and can utilize fumarate, sulfite, and thiosulfate (but not thiousulfate) as terminal electron acceptors. Some important pollutants such as polychlorinated biphenyls (PCBs) may be degraded by this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:1485799:149181114918111492536726Clostridium clariflavum DSM 19732 chromosome, complete genomeresponse regulator of the LytR/AlgR family4e-104377
NC_011898:3159411:319241031924103193168759Clostridium cellulolyticum H10, complete genometwo component transcriptional regulator, LytTR family2e-41169
NC_014624:287500:304428304428305174747Eubacterium limosum KIST612 chromosome, complete genomeResponse regulator of the LytR/AlgR family2e-36152
NC_016048:308342:328892328892329599708Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator2e-27122
NC_014376:2921769:293831329383132939053741Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-26120
NC_018704:2417902:242905824290582429768711Amphibacillus xylanus NBRC 15112, complete genomeputative two-component system response regulator3e-23108
NC_009922:42696:456394563946355717Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, LytTR family9e-22103
NC_014614:608946:611958611958612692735Clostridium sticklandii, complete genomehypothetical protein7e-22103
NC_012778:207415:217309217309218022714Eubacterium eligens ATCC 27750, complete genometwo-component system, LytT family, response regulator1e-1997.1
NC_009089:1283000:128229312822931283006714Clostridium difficile 630, complete genometwo-component response regulator4e-1995.1
NC_013316:2033906:207459320745932075183591Clostridium difficile R20291, complete genomehypothetical protein8e-1890.5
NC_014363:1973670:198281319828131983520708Olsenella uli DSM 7084 chromosome, complete genometwo component transcriptional regulator, LytTR family3e-1789
NC_014376:1842290:186064418606441861369726Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family8e-1684
NC_015690:8614000:862677486267748627514741Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component response regulator1e-1583.6
NC_014376:3796990:380806238080623808787726Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family3e-1582.4
NC_008261:576923:593925593925594641717Clostridium perfringens ATCC 13124, complete genomeDNA-binding response regulator5e-1581.3
NC_007333:3360000:336380033638003364594795Thermobifida fusca YX, complete genomeresponse regulator receiver1e-1480.5
NC_013174:501326:500595500595501329735Jonesia denitrificans DSM 20603, complete genometwo component transcriptional regulator, LytTR family1e-1480.1
NC_010520:1146000:116684911668491167565717Clostridium botulinum A3 str. Loch Maree, complete genomeLytTr DNA-binding domain family2e-1479.7
NC_015275:3407358:342575034257503426475726Clostridium lentocellum DSM 5427 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-1479
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family4e-1478.6
NC_016894:77853:840308403084764735Acetobacterium woodii DSM 1030 chromosome, complete genometwo component transcriptional regulator1e-1377
NC_015172:850802:866232866232866960729Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-1375.9
NC_015977:3424178:347917734791773479884708Roseburia hominis A2-183 chromosome, complete genomeresponse regulator of the lytr/algr family protein3e-1375.5
NC_014387:281157:282005282005282703699Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeLytTR/response regulator domain-containing protein5e-1374.7
NC_015311:403281:438961438961439716756Prevotella denticola F0289 chromosome, complete genomeLytTr DNA-binding domain-containing protein7e-1374.3
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein1e-1273.6
NC_006510:1501487:152070415207041521444741Geobacillus kaustophilus HTA426, complete genometranscriptional regulator2e-1272.8
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1272.8
NC_015687:1811573:181561018156101816371762Clostridium acetobutylicum DSM 1731 chromosome, complete genomeresponse regulator4e-1272
NC_003030:1811820:181401018140101814771762Clostridium acetobutylicum ATCC 824, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)4e-1272
NC_017295:1809386:181342318134231814184762Clostridium acetobutylicum EA 2018 chromosome, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)4e-1272
NC_007644:1638083:165823516582351658972738Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, LytR/AlgR family6e-1271.2
NC_009615:2311352:231296223129622313666705Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component system response regulator1e-1170.1
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family3e-1168.9
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family3e-1168.9
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator3e-1168.6
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family4e-1168.2
NC_016048:375676:399488399488400183696Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator6e-1167.8
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator8e-1167.4
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator8e-1167.4
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator8e-1167.4
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator9e-1167
NC_013037:5442131:545847354584735459195723Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family4e-1065.1
NC_009615:2902871:292380429238042924535732Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component response regulator5e-1064.7
NC_014934:11341:366453664537337693Cellulophaga algicola DSM 14237 chromosome, complete genometwo component transcriptional regulator, lyttr family7e-1064.3
NC_014624:3316916:332634833263483326935588Eubacterium limosum KIST612 chromosome, complete genomeLytTR family two component transcriptional regulator9e-1063.9
NC_015977:3424178:347591234759123476646735Roseburia hominis A2-183 chromosome, complete genometwo-component system response regulator protein8e-1063.9
NC_013222:2795919:281526028152602815907648Robiginitalea biformata HTCC2501, complete genometwo-component system response regulator protein1e-0963.5
NC_009697:3463736:349645534964553497219765Clostridium botulinum A str. ATCC 19397 chromosome, completeLytTr family DNA-binding response regulator1e-0963.5
NC_009495:3502000:352046735204673521231765Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding response regulator, LytTr family1e-0963.5
NC_014933:3715467:371826637182663718967702Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-0963.2
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0963.2
NC_012563:3729817:376253737625373763301765Clostridium botulinum A2 str. Kyoto, complete genomeDNA-binding response regulator, LytTr family3e-0962.4
NC_008595:661507:676779676779677498720Mycobacterium avium 104, complete genomeDNA-binding response regulator PhoP5e-0961.6
NC_015167:313506:335892335892336584693Cellulophaga lytica DSM 7489 chromosome, complete genomeLytTR family two component transcriptional regulator5e-0961.6
NC_014152:2849991:286797228679722868697726Thermincola sp. JR, complete genometwo component transcriptional regulator, LytTR family5e-0961.6
NC_013730:1074393:108006810800681080817750Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family4e-0961.6
NC_016609:2951301:298003529800352980781747Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator5e-0961.2
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator8e-0960.8
NC_015726:3452232:345363334536333454394762Cupriavidus necator N-1 chromosome 1, complete sequenceLytR family transcriptional regulator1e-0860.5
NC_009699:3581376:361409836140983614862765Clostridium botulinum F str. Langeland chromosome, complete genomeLytTr family DNA-binding response regulator9e-0960.5
NC_017297:3594000:361271236127123613476765Clostridium botulinum F str. 230613 chromosome, complete genomeDNA-binding response regulator, LytTr family9e-0960.5
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator9e-0960.5
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator9e-0960.5
NC_012984:3077004:308966030896603090403744Lactobacillus plantarum JDM1, complete genomeresponse regulator; accesory gene regulator protein A2e-0859.7
NC_018868:2615822:263686726368672637601735Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomealginate biosynthesis regulatory protein AlgR2e-0859.7
NC_008312:1067500:1082962108296210863543393Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase2e-0859.3
NC_014219:999648:99964899964810007811134Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein3e-0858.9
NC_010520:3580000:359767035976703598434765Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding response regulator, LytTr family3e-0858.9
NC_015589:3852217:386341738634173864118702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver4e-0858.5
NC_012918:2277500:2300001230000123013741374Geobacter sp. M21 chromosome, complete genomeFis family transcriptional regulator4e-0858.5
NC_016641:2773757:2773757277375727753491593Paenibacillus terrae HPL-003 chromosome, complete genomeAraC family transcriptional regulator4e-0858.5
NC_013194:1040197:105397910539791054695717Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LytTR family5e-0858.2
NC_014616:54500:567695676957485717Bifidobacterium bifidum S17 chromosome, complete genometwo-component response regulator7e-0857.8
NC_013037:6209424:621057962105796211313735Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family7e-0857.8
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator6e-0857.8
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator6e-0857.8
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator6e-0857.8
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family6e-0857.8
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-0857.8
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator6e-0857.8
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator6e-0857.8
NC_012778:841934:882083882083882793711Eubacterium eligens ATCC 27750, complete genomehypothetical protein6e-0857.8
NC_020054:3501467:351843235184323519181750Fibrella aestuarina BUZ 2 drat genometwo component transcriptional regulator, LytTR family1e-0757.4
NC_010545:1904162:190705319070531907823771Corynebacterium urealyticum DSM 7109, complete genometwo-component system response regulator9e-0857.4
NC_014973:2894248:2897876289787628994951620Geobacter sp. M18 chromosome, complete genomemulti-sensor signal transduction histidine kinase9e-0857.4
NC_014633:837588:857228857228857983756Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator8e-0857.4
NC_015510:6653159:666073866607386661478741Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator8e-0857.4
NC_008312:1067500:1079303107930310827043402Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase1e-0756.6
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator1e-0756.6
NC_007907:5185510:525137852513785252061684Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0756.6
NC_015589:2281054:228878522887852289513729Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeLytTr DNA-binding protein2e-0756.2
NC_007575:973559:975967975967976665699Sulfurimonas denitrificans DSM 1251, complete genomeLytR/AlgR family transcriptional regulator2e-0756.2
NC_019902:498500:511540511540512247708Thioalkalivibrio nitratireducens DSM 14787, complete genomeresponse regulator receiver protein2e-0756.2
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0756.2
NC_008009:1264791:126479112647911265579789Acidobacteria bacterium Ellin345, complete genometranscriptional regulator, LytR/AlgR family2e-0755.8
NC_018515:1406816:141371214137121414566855Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeresponse regulator containing CheY-like receiver and SARP domains3e-0755.8
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator4e-0755.5
NC_020126:7686076:768779776877977688558762Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator5e-0754.7
NC_012778:1946924:197010019701001970786687Eubacterium eligens ATCC 27750, complete genometwo-component system, LytT family, response regulator LytT6e-0754.7
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family7e-0754.3
NC_014169:1740243:175497117549711755747777Bifidobacterium longum subsp. longum JDM301 chromosome, completewinged helix family two component transcriptional regulator6e-0754.3
NC_014550:615609:618538618538619245708Arthrobacter arilaitensis Re117, complete genometwo-component system response regulator9e-0753.9
NC_013731:11605:284162841629144729Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencetwo component transcriptional regulator, LytTR family9e-0753.9
NC_018515:3108755:311369831136983114390693Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain9e-0753.9
NC_020272:3187482:3201383320138332024591077Bacillus amyloliquefaciens IT-45, complete genomeresponse regulator MprA1e-0653.9
NC_009617:648000:666775666775667533759Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLytTR family two component transcriptional regulator1e-0653.9
NC_013037:1015210:102112910211291021830702Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, winged helix family1e-0653.5
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator1e-0653.5
NC_016584:1998000:203701120370112037409399Desulfosporosinus orientis DSM 765 chromosome, complete genomeresponse regulator of the LytR/AlgR family2e-0653.1
NC_014393:19279:2489124891279773087Clostridium cellulovorans 743B chromosome, complete genomesignal transduction histidine kinase, LytS2e-0652.8
NC_007907:2879568:289297128929712893726756Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0652.8
NC_011830:3904034:392032539203253921080756Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LytTR family2e-0652.8
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator2e-0652.8
NC_013406:3819577:3837326383732638390081683Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator2e-0652.4
NC_013730:2490000:250045225004522501119668Spirosoma linguale DSM 74, complete genome3e-0652
NC_019897:2959002:2976533297653329781641632Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain4e-0652
NC_014933:3015678:3032317303231730334441128Bacteroides helcogenes P 36-108 chromosome, complete genomeresponse regulator receiver sensor signal transduction histidine kinase4e-0651.6
NC_010718:2265447:226544722654472266163717Natranaerobius thermophilus JW/NM-WN-LF, complete genometwo component transcriptional regulator, LytTR family5e-0651.6
NC_021182:1473535:147521614752161475986771Clostridium pasteurianum BC1, complete genomeresponse regulator of the LytR/AlgR family7e-0650.8
NC_007907:960104:102497810249781025670693Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-0650.8