Pre_GI: BLASTP Hits

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Query: NC_006361:3132000:3150106 Nocardia farcinica IFM 10152, complete genome

Start: 3150106, End: 3151083, Length: 978

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:118710:134252134252135148897Streptomyces fulvissimus DSM 40593, complete genomeLysR-family transcriptional regulatory protein3e-79295
NC_016111:1:493149315908978Streptomyces cattleya NRRL 8057, complete genometranscriptional regulator3e-71269
NC_013521:2254534:226738022673802268306927Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator1e-49197
NC_016111:6175975:619198361919836192885903Streptomyces cattleya NRRL 8057, complete genomeLysR family transcriptional regulator2e-35150
NC_012669:832555:834570834570835478909Beutenbergia cavernae DSM 12333, complete genometranscriptional regulator, LysR family7e-35147
NC_013595:6978614:698216169821616983054894Streptosporangium roseum DSM 43021, complete genomeTranscriptional regulator-like protein9e-33140
NC_015953:5612446:562948156294815630371891Streptomyces sp. SirexAA-E chromosome, complete genomeLysR family transcriptional regulator1e-31137
NC_018750:3741581:376479037647903765677888Streptomyces venezuelae ATCC 10712, complete genomeLysR-family transcriptional regulatory protein5e-29128
NC_010581:3387118:338815833881583389057900Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family3e-27122
NC_003155:921494:921494921494922408915Streptomyces avermitilis MA-4680, complete genomeLysR-family transcriptional regulator2e-1893.6
NC_017186:7480714:749725774972577498168912Amycolatopsis mediterranei S699 chromosome, complete genomeLysR family transcriptional regulator2e-1893.6
NC_014318:7480669:749721274972127498123912Amycolatopsis mediterranei U32 chromosome, complete genomeLysR family trancsriptional regulator2e-1893.6
NC_009921:4186000:418936341893634190262900Frankia sp. EAN1pec, complete genometranscriptional regulator, LysR family1e-1687.8
NC_013929:10109680:101217291012172910122592864Streptomyces scabiei 87.22 chromosome, complete genomeLysR family transcriptional regulator1e-1584.3
NC_014323:4355266:436104943610494361951903Herbaspirillum seropedicae SmR1 chromosome, complete genomeLysR family transcription regulator protein5e-1582
NC_013521:2254534:226969922696992270571873Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator1e-1377.8
NC_008600:3488000:350817935081793509108930Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, LysR family3e-1272.8
NC_006512:1722138:172518817251881726105918Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, LysR family8e-1271.6
NC_017200:3501500:352164335216433522548906Bacillus thuringiensis serovar finitimus YBT-020 chromosome,putative als operon regulatory protein AlsR9e-1271.2
NC_015458:1692401:170449717044971705399903Pusillimonas sp. T7-7 chromosome, complete genometranscriptional regulator, LysR family1e-1170.9
NC_003909:3432073:345497534549753455880906Bacillus cereus ATCC 10987, complete genomeals operon regulatory protein AlsR, putative1e-1170.9
NC_005945:3415135:343186134318613432766906Bacillus anthracis str. Sterne, complete genomeals operon regulatory protein AlsR, putative1e-1170.9
NC_005957:3488021:350806935080693508974906Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator, LysR family1e-1170.9
NC_007530:3414568:343129534312953432200906Bacillus anthracis str. 'Ames Ancestor', complete genomeals operon regulatory protein alsr, putative1e-1170.9
NC_012472:3503000:352314135231413524046906Bacillus cereus 03BB102, complete genomeputative als operon regulatory protein AlsR1e-1170.9
NC_003997:3414441:343116834311683432073906Bacillus anthracis str. Ames, complete genomeals operon regulatory protein AlsR, putative1e-1170.9
NC_014335:3408081:342853734285373429442906Bacillus cereus biovar anthracis str. CI chromosome, completeLysR family transcriptional regulator1e-1170.9
NC_006274:3490598:351062435106243511529906Bacillus cereus E33L, complete genometranscriptional regulator, LysR family1e-1170.9
NC_012581:803456:806537806537807442906Bacillus anthracis str. CDC 684 chromosome, complete genomeputative als operon regulatory protein AlsR1e-1170.9
NC_012659:3416000:343119534311953432100906Bacillus anthracis str. A0248, complete genomeputative als operon regulatory protein AlsR1e-1170.9
NC_018681:5695343:571462357146235715504882Nocardia brasiliensis ATCC 700358 chromosome, complete genomeLysR family transcriptional regulator2e-1170.1
NC_014165:2081914:208323820832382084143906Thermobispora bispora DSM 43833 chromosome, complete genomeLysR family transcriptional regulator2e-1170.1
NC_008148:1567703:157249215724921573409918Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, LysR family2e-1170.1
NC_004129:2328491:235442323544232355340918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family9e-1168.2
NC_008269:428898:444555444555445487933Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetranscriptional regulator, LysR family9e-1167.8
NC_013159:2832552:283733528373352838228894Saccharomonospora viridis DSM 43017, complete genometranscriptional regulator1e-1067.8
NC_007951:925442:925442925442926428987Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, LysR family1e-1067.4
NC_010694:1:205502055021431882Erwinia tasmaniensis, complete genomeHTH-type transcriptional regulator BudR (Bud operon transcriptional regulator)2e-1067
NC_015136:813701:8329678329678340041038Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator3e-1066.2
NC_009925:1003000:101786010178601018756897Acaryochloris marina MBIC11017, complete genometranscriptional regulator, LysR family3e-1065.9
NC_013854:330543:345853345853346752900Azospirillum sp. B510, complete genomelysR-like transcriptional regulator5e-1065.5
NC_012214:1:216972169722578882Erwinia pyrifoliae Ep1/96, complete genomeHTH-type transcriptional regulator BudR (Bud operon transcriptional regulator)7e-1065.1
NC_016111:2651500:265728926572892658194906Streptomyces cattleya NRRL 8057, complete genomelysR-type transcriptional regulator7e-1065.1
NC_016109:8664974:871254587125458713234690Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0963.9
NC_016109:62000:700457004570734690Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0963.9
NC_007650:420745:427198427198428085888Burkholderia thailandensis E264 chromosome II, complete sequencetranscriptional regulator, LysR family3e-0963.2
NC_011420:3650724:367195236719523672890939Rhodospirillum centenum SW, complete genomehydrogen peroxide-inducible genes activator3e-0962.8
NC_015677:1460000:147613114761311477033903Ramlibacter tataouinensis TTB310 chromosome, complete genomeLysR family transcriptional regulator3e-0962.8
NC_008148:2231045:225429322542932255198906Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, LysR family6e-0962
NC_009436:1679265:167926516792651680176912Enterobacter sp. 638, complete genomeLysR family transcriptional regulator7e-0961.6
NC_015690:1967244:1990674199067419916901017Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator1e-0860.8
NC_010623:1961685:200586820058682006767900Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-0860.5
NC_016935:2503071:252203525220352522907873Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator2e-0860.5
NC_013757:1343396:136046913604691361407939Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, LysR family3e-0859.7
NC_012691:2614603:271470227147022715592891Tolumonas auensis DSM 9187, complete genometranscriptional regulator, LysR family3e-0859.7
NC_014500:2402881:240288124028812403795915Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-0859.3
NC_017033:2081206:208320120832012084145945Frateuria aurantia DSM 6220 chromosome, complete genometranscriptional regulator4e-0859.3
NC_014219:2253023:226642222664222267327906Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LysR family4e-0858.9
NC_010625:1415500:143142814314281432357930Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family5e-0858.9
NC_009720:813157:825822825822826766945Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator5e-0858.9
NC_014650:2417509:242372524237252424627903Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator7e-0858.5
NC_007963:1582089:160330716033071604230924Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family7e-0858.2
NC_003902:3666544:372279437227943723678885Xanthomonas campestris pv. campestris str. ATCC 33913, completeregulatory protein bphR8e-0858.2
NC_007086:1224867:123584212358421236726885Xanthomonas campestris pv. campestris str. 8004, complete genomeregulatory protein bphR8e-0858.2
NC_011283:2323687:234077623407762341648873Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator BudR9e-0858.2
NC_013947:1956923:196952919695291970404876Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LysR family2e-0757.4
NC_015381:1623587:166449516644951665412918Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator1e-0757.4
NC_010508:1898547:191011119101111911004894Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family2e-0757
NC_016845:3024041:302483130248313025703873Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator2e-0757
NC_012731:2974745:297695029769502977822873Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator2e-0757
NC_009648:2252757:225354722535472254419873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator2e-0757
NC_010170:4409683:441792844179284418830903Bordetella petrii, complete genometranscriptional regulator, LysR-family2e-0757
NC_012791:2233098:224016122401612241069909Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, LysR family2e-0756.6
NC_013595:3388000:340600734060073406735729Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0756.6
NC_015563:3511951:353574935357493536705957Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_016943:3270308:328229232822923283251960Blastococcus saxobsidens DD2, complete genomeLysR family transcriptional regulator2e-0756.6
NC_016113:11500:144521445215168717Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein3e-0756.2
NC_012997:3651993:366218636621863663103918Teredinibacter turnerae T7901, complete genometranscriptional regulator, LysR family3e-0756.2
NC_006510:1446490:146725614672561468167912Geobacillus kaustophilus HTA426, complete genometranscription activator of glutamate synthase(LysR family)3e-0756.2
NC_013411:2236166:225897722589772259885909Geobacillus sp. Y412MC61, complete genometranscriptional regulator, LysR family3e-0756.2
NC_014915:1376035:139892113989211399829909Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, LysR family3e-0756.2
NC_016593:1527456:154935815493581550269912Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, LysR4e-0755.8
NC_007951:3631772:364615936461593647070912Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, LysR family4e-0755.8
NC_008699:857837:875971875971876963993Nocardioides sp. JS614, complete genomeLysR, substrate-binding5e-0755.8
NC_015137:1207769:122387612238761224742867Burkholderia sp. CCGE1001 chromosome 2, complete sequenceLysR family transcriptional regulator6e-0755.5
NC_015556:2265940:227657922765792277505927Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, LysR family5e-0755.5
NC_013446:2130021:214586821458682146767900Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family5e-0755.5
NC_010688:2400471:241478224147822415666885Xanthomonas campestris pv. campestris, complete genomeTranscriptional regulator, LysR family6e-0755.1
NC_012660:4669500:467522846752284676151924Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator1e-0654.3
NC_013093:4580448:458189245818924582767876Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LysR family1e-0653.9
NC_009434:608765:634459634459635358900Pseudomonas stutzeri A1501, complete genomeLysR family transcriptional regulator2e-0653.5
NC_008313:3456741:346156634615663462534969Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, LysR-family2e-0653.5
NC_010086:871723:899395899395900306912Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family2e-0653.5
NC_009720:3210387:321353332135333214531999Xanthobacter autotrophicus Py2, complete genome3e-0653.1
NC_016830:530397:532354532354533244891Pseudomonas fluorescens F113 chromosome, complete genomeprotein YnfL3e-0653.1
NC_010170:4463000:448112344811234482013891Bordetella petrii, complete genometranscriptional regulator, LysR family3e-0653.1
NC_010002:4572573:461278346127834613673891Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family3e-0653.1
NC_009348:1663870:167351116735111674479969Aeromonas salmonicida subsp. salmonicida A449, complete genomeLysR family transcriptional regulator4e-0652.8
NC_014306:642152:659268659268660179912Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family5e-0652
CP002207:2169277:218817021881702189069900Bacillus atrophaeus 1942, complete genomeputative HTH-type transcriptional regulator8e-0651.6
UCMB5137:2128500:215197521519752152874900Bacillus atrophaeus UCMB-5137putative HTH-type transcriptional regulator8e-0651.6
NC_014639:2169277:218817021881702189069900Bacillus atrophaeus 1942 chromosome, complete genomeHTH-type transcriptional regulator8e-0651.6
NC_009832:1664238:167195616719561672858903Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family7e-0651.6
NC_019673:1420198:143785814378581438763906Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LysR family9e-0651.2
NC_017030:2728175:274143727414372742321885Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator9e-0651.2
NC_010170:1324758:133532013353201336210891Bordetella petrii, complete genometranscriptional regulator, LysR-family1e-0551.2