Pre_GI Gene

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Host: NC_007951 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007951:925442 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
925442926428987Transcriptional regulator LysR familyQuickGO ontologyBLASTP
926557927462906Prolipoprotein diacylglyceryl transferaseQuickGO ontologyBLASTP
927575928306732hypothetical proteinBLASTP
928510928884375hypothetical proteinBLASTP
928883929131249hypothetical protein
929332930243912hypothetical protein
930474930842369hypothetical protein
931544932080537ABC amino acid transporter periplasmic ligand binding proteinQuickGO ontologyBLASTP
932061932375315hypothetical protein
932331932627297Transcriptional regulator XRE familyQuickGO ontologyBLASTP
932719933234516hypothetical proteinBLASTP
933365934096732hypothetical proteinBLASTP
934251934739489hypothetical proteinBLASTP
934861935142282hypothetical protein
935483935776294hypothetical proteinBLASTP
936277936840564hypothetical proteinBLASTP
936858937772915Putative hydrolaseQuickGO ontologyBLASTP
937864938550687hypothetical proteinBLASTP
9385539396261074hypothetical proteinBLASTP
939680940555876Putative dehydrogenaseQuickGO ontologyBLASTP
9405489417531206major facilitator superfamily MFS transporterQuickGO ontologyBLASTP
941759942712954Transcriptional regulator IclR familyQuickGO ontologyBLASTP
9429429442881347Major facilitator superfamily MFS metaboliteH symporterQuickGO ontologyBLASTP
944333944662330hypothetical proteinBLASTP
944692945501810Putative dehydrogenaseQuickGO ontologyBLASTP
945512946354843hypothetical protein
946396946794399Anti-Sigm factor ChrRQuickGO ontologyBLASTP
9468139486031791Putative dehydrogenaseQuickGO ontologyBLASTP