Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:530397 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
530397530852456protein GspMQuickGO ontology
5309575322341278major facilitator superfamily permeaseQuickGO ontologyBLASTP
532354533244891protein YnfLQuickGO ontologyBLASTP
5332795373284050hypothetical protein
537455538417963alpha beta hydrolase fold proteinQuickGO ontologyBLASTP
538855539298444hypothetical proteinBLASTP
5394855406991215Major facilitator family transporterQuickGO ontologyBLASTP
540835541713879putative glutamate racemaseQuickGO ontologyBLASTP
541736542710975hypothetical proteinBLASTP
543300543497198hypothetical proteinBLASTP
543575543919345hypothetical proteinBLASTP
544310544909600DNA-binding proteinQuickGO ontologyBLASTP
544899545777879hypothetical proteinBLASTP
545819546523705protein QueCQuickGO ontologyBLASTP
547013547459447Excinuclease ATPase subunitQuickGO ontologyBLASTP
54750154872712273-oxoacyl-acyl carrier protein synthase iiQuickGO ontologyBLASTP
5487275494557293-ketoacyl-ACP reductaseQuickGO ontologyBLASTP
5494525499194683-hydroxydecanoyl-ACP dehydrataseQuickGO ontologyBLASTP
54991655111211973-oxoacyl-ACP synthaseQuickGO ontologyBLASTP
551109551591483lipoproteinQuickGO ontology
551588552316729SAM-dependent methyltransferaseQuickGO ontologyBLASTP
5523275535741248FAD-binding proteinQuickGO ontologyBLASTP
5535615547181158sodium hydrogen exchangerQuickGO ontology
5547155570332319membrane proteinQuickGO ontologyBLASTP
557038557631594outer membrane lipoprotein carrier proteinQuickGO ontologyBLASTP
5576285580534264-hydroxybenzoyl- thioesterase domain-containing proteinQuickGO ontologyBLASTP
5580465595901545histidine ammonia-lyaseQuickGO ontologyBLASTP
559571560515945Lysophospholipid acyltransferaseQuickGO ontologyBLASTP
560512561246735glycosyl group 2 family proteinQuickGO ontologyBLASTP