Pre_GI: BLASTP Hits

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Query: NC_006155:2116834:2128303 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2128303, End: 2129325, Length: 1023

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family1e-129462
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family3e-126451
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase5e-126451
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase4e-124444
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase9e-121433
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase1e-81303
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase6e-78291
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein3e-77288
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase2e-76285
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase8e-74277
NC_005810:1663672:167309716730971673675579Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase2e-68259
NC_008150:1384102:139870513987051399262558Yersinia pestis Antiqua, complete genomehypothetical protein2e-66253
NC_008149:2517538:253577225357722536329558Yersinia pestis Nepal516, complete genomehypothetical protein4e-66251
NC_009381:1414985:142000214200021420559558Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-65250
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase1e-63243
NC_017265:2306500:232086923208692321384516Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Integrase2e-57223
NC_017168:3535786:354487235448723545387516Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-57223
NC_003143:2101902:211562621156262116141516Yersinia pestis CO92, complete genomehypothetical protein2e-57223
NC_015942:403296:4159944159944170011008Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-43177
NC_014837:1570500:157833915783391578668330Pantoea sp. At-9b chromosome, complete genome5e-38158
NC_017986:4931104:4946514494651449475211008Pseudomonas putida ND6 chromosome, complete genomephage integrase4e-25115
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase6e-24111
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC5e-23108
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein2e-21103
NC_010634:2124185:213599021359902136214225Yersinia pseudotuberculosis PB1/+, complete genomephage integrase family site specific recombinase6e-21101
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase6e-21101
NC_017265:2306500:232127223212722321541270Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-20100
NC_010159:2128157:214251321425132142737225Yersinia pestis Angola, complete genome1e-20100
NC_017168:3535786:354532035453203545544225Yersinia pestis A1122 chromosome, complete genomephage integrase family site specific recombinase1e-20100
NC_008027:2331617:2337757233775723388061050Pseudomonas entomophila L48, complete genomesite-specific recombinase, integrase family1e-1894.4
NC_003919:3060484:3093992309399230952331242Xanthomonas axonopodis pv. citri str. 306, complete genomephage-related integrase3e-1892.8
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like4e-1892.4
NC_010717:3564955:3570700357070035717281029Xanthomonas oryzae pv. oryzae PXO99A, complete genomesite-specific recombinase, phage integrase family8e-1891.7
NC_014722:846084:8501788501788513681191Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein4e-1789.4
NC_002947:4484824:449569044956904496649960Pseudomonas putida KT2440, complete genomesite-specific recombinase, phage integrase family7e-1788.6
NC_003902:3544743:3558999355899935601981200Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase2e-1686.7
NC_007494:714525:7351117351117362321122Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative integrase4e-1685.9
NC_005773:176885:1914781914781926261149Pseudomonas syringae pv. phaseolicola 1448A, complete genomesite-specific recombinase, phage integrase family7e-1685.1
NC_005773:5636606:5655009565500956561571149Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, site-specific recombinase, phage integrase family1e-1584.3
NC_012660:3689223:370301937030193703990972Pseudomonas fluorescens SBW25 chromosome, complete genomeintegrase (pseudogene)1e-1584.3
NC_017986:4885979:4888798488879848898621065Pseudomonas putida ND6 chromosome, complete genomeintegrase2e-1583.6
NC_005773:5636606:5641595564159556427431149Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, site-specific recombinase, phage integrase family3e-1583.2
NC_011770:2690501:2690501269050126915261026Pseudomonas aeruginosa LESB58, complete genomesite-specific recombinase, phage integrase family2e-1583.2
NC_007434:1712000:1764416176441617655161101Burkholderia pseudomallei 1710b chromosome I, complete sequencePhage integrase family2e-1480.1
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein4e-1479.3
NC_009053:553298:5572235572235582631041Actinobacillus pleuropneumoniae L20, complete genomepredicted phage integrase family protein1e-1377.4
NC_013716:1138441:115119811511981151500303Citrobacter rodentium ICC168, complete genome6e-1375.1
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase4e-1169.3
NC_017986:2985514:299417429941742994953780Pseudomonas putida ND6 chromosome, complete genomesite-specific recombinase3e-1169.3
NC_010002:5143869:5157818515781851588461029Delftia acidovorans SPH-1, complete genomeintegrase family protein3e-1169.3
NC_017246:956868:956868956868957779912Brucella melitensis M5-90 chromosome chromosome I, completephage-related integrase5e-1168.9
NC_003317:1030220:1049498104949810505081011Brucella melitensis 16M chromosome I, complete sequenceINTEGRASE/RECOMBINASE7e-1168.6
NC_010169:957565:9575659575659585901026Brucella suis ATCC 23445 chromosome I, complete sequencehypothetical protein6e-1168.6
NC_010742:955104:9551049551049561291026Brucella abortus S19 chromosome 1, complete sequencePhage integrase6e-1168.6
NC_004310:937800:9378009378009388251026Brucella suis 1330 chromosome I, complete sequencesite-specific recombinase, phage integrase family6e-1168.6
NC_010103:936250:9362509362509372751026Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein6e-1168.6
NC_006932:956805:9568059568059578301026Brucella abortus biovar 1 str. 9-941 chromosome I, completesite-specific recombinase, phage integrase family6e-1168.6
NC_016778:96792:1160681160681170931026Brucella canis HSK A52141 chromosome 1, complete sequenceintegrase6e-1168.6
NC_016795:1441024:1460297146029714613221026Brucella abortus A13334 chromosome 1, complete sequenceintegrase6e-1168.6
NC_016797:937753:9377539377539387781026Brucella suis VBI22 chromosome I, complete sequencephage integrase family site specific recombinase6e-1168.6
NC_017251:937786:9377869377869388111026Brucella suis 1330 chromosome I, complete genomephage integrase family site specific recombinase6e-1168.6
NC_012441:956609:9566099566099576341026Brucella melitensis ATCC 23457 chromosome I, complete sequencephage-related integrase6e-1168.6
NC_017244:956554:9565549565549575791026Brucella melitensis M28 chromosome chromosome 1, complete sequencephage-related integrase6e-1168.6
NC_017248:953131:9531319531319541561026Brucella melitensis NI chromosome chromosome I, complete sequencephage integrase family site specific recombinase6e-1168.6
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase9e-1168.2
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family9e-1168.2
NC_009654:615504:6208096208096219241116Marinomonas sp. MWYL1, complete genomehypothetical protein1e-1067.4
NC_013119:942079:9420799420799431041026Brucella microti CCM 4915 chromosome 1, complete sequencesite-specific recombinase, phage integrase family2e-1067.4
NC_007712:2897000:2906392290639229075161125Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-1067
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase8e-1065.1
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase7e-1065.1
NC_011894:6382636:6386877638687763879111035Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein7e-1065.1
NC_007508:4476726:448916944891694489969801Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative phage-related integrase (fragment)1e-0964.3
NC_014664:3003633:3019218301921830202761059Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeintegrase family protein3e-0963.2
NC_013446:4045000:4052312405231240533461035Comamonas testosteroni CNB-2, complete genomehypothetical protein1e-0860.8
NC_010645:369408:4026334026334036671035Bordetella avium 197N, complete genomeintegrase2e-0860.1
NC_010102:1137247:114318211431821144009828Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0860.1
NC_009656:2663387:266807926680792668627549Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein2e-0860.1
NC_010508:451184:461527461527462063537Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence6e-0858.5
NC_014972:480355:4934964934964946591164Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein7e-0858.5
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative2e-0756.6
NC_012947:3015985:302838230283823029305924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda integrase2e-0756.6
NC_013132:7954000:7968218796821879694891272Chitinophaga pinensis DSM 2588, complete genomeintegrase family protein4e-0755.8
NC_017060:59500:1055351055351066591125Rahnella aquatilis HX2 plasmid PRA1, complete sequencelambda integrase5e-0755.5
NC_014355:2210884:2224323222432322255071185Candidatus Nitrospira defluvii, complete genomeputative phage integrase5e-0755.5
NC_008577:1455000:1458630145863014598291200Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein6e-0755.5
NC_013941:1613595:162264716226471623387741Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeintegrase8e-0755.1
NC_011353:1716037:172511817251181725858741Escherichia coli O157:H7 str. EC4115 chromosome, complete genome8e-0755.1
NC_002695:1794635:180352718035271804219693Escherichia coli O157:H7 str. Sakai, complete genomeintegrase1e-0654.7
NC_013008:1715831:172409317240931724785693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase1e-0654.7
NC_013361:1754346:176509417650941765786693Escherichia coli O26:H11 str. 11368 chromosome, complete genome1e-0654.7
NC_011601:1466496:147555814755581476250693Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome9e-0754.7
NC_002655:2264773:228294922829492283650702Escherichia coli O157:H7 EDL933, complete genomeputative integrase fragment9e-0754.7
NC_010102:1137247:1149438114943811505171080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0653.9
NC_015062:99969:1087051087051098291125Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencelambda integrase2e-0653.5
NC_011080:1944226:1972465197246519735441080Salmonella enterica subsp. enterica serovar Newport str. SL254,phage integrase3e-0653.1
NC_010002:3002354:3015297301529730165441248Delftia acidovorans SPH-1, complete genomeintegrase family protein2e-0653.1
NC_011294:1220526:1226471122647112275501080Salmonella enterica subsp. enterica serovar Enteritidis strintegrase2e-0653.1
NC_014774:1210004:125682512568251257724900Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeintegrase family protein3e-0652.8
NC_010067:892729:914941914941915159219Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0652.8
NC_016609:4233701:4271948427194842730391092Niastella koreensis GR20-10 chromosome, complete genomeintegrase family protein6e-0652
NC_016026:2082500:2095118209511820962931176Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage integrase family protein6e-0652
NC_011205:1345511:1351456135145613525351080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage integrase7e-0652
NC_011094:1923870:1945403194540319464821080Salmonella enterica subsp. enterica serovar Schwarzengrund strphage integrase7e-0652