Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:1923870 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
192262419239071284integral membrane protein PqiA family proteinQuickGO ontologyBLASTP
192387019265092640mce-like proteinQuickGO ontologyBLASTP
192648519280261542rRNA cytosine-C5--methyltransferase RsmFQuickGO ontologyBLASTP
19281401928379240hypothetical proteinBLASTP
19284901928681192hypothetical proteinBLASTP
19287001929350651serinethreonine protein phosphatase 1QuickGO ontologyBLASTP
19295751929739165hypothetical proteinBLASTP
19298251929950126hypothetical protein
19300241930746723guanine nucleotide exchange factor SopEQuickGO ontologyBLASTP
19310271931158132hypothetical proteinBLASTP
19314301931825396hypothetical proteinBLASTP
19321531932629477hypothetical proteinBLASTP
19330171933436420acetyltransferaseQuickGO ontologyBLASTP
19335651933765201hypothetical proteinBLASTP
19338121933934123hypothetical proteinBLASTP
19339811934127147hypothetical proteinBLASTP
19358631935991129hypothetical proteinBLASTP
19374321937590159hypothetical proteinBLASTP
19375941938214621hypothetical proteinBLASTP
19387021938848147hypothetical proteinBLASTP
19393621939487126arsenical pump membrane proteinQuickGO ontologyBLASTP
194035419416821329side tail fiber proteinQuickGO ontologyBLASTP
19422351942726492hypothetical proteinBLASTP
19430291943196168hypothetical proteinBLASTP
19439821944269288lytic enzymeQuickGO ontologyBLASTP
194430019454061107exodeoxyribonuclease 8QuickGO ontologyBLASTP
194540319464821080phage integraseQuickGO ontologyBLASTP
19468571947210354hypothetical proteinBLASTP
19472271948102876copper resistance protein DQuickGO ontologyBLASTP
19481031948477375hypothetical proteinBLASTP
19486151948845231DNA polymerase III subunit thetaQuickGO ontologyBLASTP
19489531949609657carbon-nitrogen family hydrolaseQuickGO ontologyBLASTP
19496331950331699exodeoxyribonuclease XQuickGO ontologyBLASTP
195036819524192052protease 2QuickGO ontologyBLASTP