Pre_GI: BLASTP Hits

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Query: NC_004578:3241618:3247704 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3247704, End: 3247997, Length: 294

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4940000:4953854495385449554071554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:1190000:1211249121124912128021554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:6089958:6101890610189061034431554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:3597083:3616790361679036183431554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:4781326:4790778479077847923311554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:4499143:4509044450904445105971554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:3597083:3609449360944936110021554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:212468:2195542195542211071554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:4499143:4511824451182445133771554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:5916711:5936477593647759380301554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:5336773:5402565540256554041181554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:20738:4518345183467361554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:6138669:6145421614542161469741554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:5336773:5365761536576153673141554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:5916711:5932848593284859344011554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:4061372:4071614407161440731671554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:20738:5497154971565241554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_004578:2671508:2689523268952326910761554Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy5, transposase4e-31133
NC_002947:5386489:5401790540179054033221533Pseudomonas putida KT2440, complete genomeISPpu15, transposase Orf21e-1375.1
NC_002947:4604582:4625967462596746274991533Pseudomonas putida KT2440, complete genomeISPpu15, transposase Orf21e-1375.1
NC_002947:737924:7449647449647464961533Pseudomonas putida KT2440, complete genomeISPpu15, transposase Orf21e-1375.1
NC_015733:1555476:1582731158273115842631533Pseudomonas putida S16 chromosome, complete genomeISPpu15, transposase Orf21e-1375.1
NC_015733:1179977:1187184118718411887161533Pseudomonas putida S16 chromosome, complete genomeISPpu15, transposase Orf21e-1375.1
NC_010322:583842:5959125959125974321521Pseudomonas putida GB-1 chromosome, complete genometransposase IS662e-1374.7
NC_010322:5349000:5360715536071553622351521Pseudomonas putida GB-1 chromosome, complete genometransposase IS662e-1374.7
NC_016830:6589575:6603059660305966045821524Pseudomonas fluorescens F113 chromosome, complete genomeISPsy5, transposase9e-0958.9
NC_016830:1182765:1192530119253011940531524Pseudomonas fluorescens F113 chromosome, complete genomeISPsy5, transposase9e-0958.9
NC_020209:1847895:1858209185820918597201512Pseudomonas poae RE*1-1-14, complete genomeISPsy5, transposase1e-0755.5
NC_002947:4484824:4493707449370744952391533Pseudomonas putida KT2440, complete genomeISPpu13, transposase Orf21e-0652