Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:1182765 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
118276511851132349TonB-dependent receptorQuickGO ontologyBLASTP
118509711861821086diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensorsQuickGO ontologyBLASTP
11870601187740681hypothetical protein
11879751188256282protein YaeOQuickGO ontologyBLASTP
118855911897521194Colicin E3QuickGO ontologyBLASTP
119068111910643844-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
11912451191841597TetR family transcriptional regulatorQuickGO ontologyBLASTP
119253011940531524ISPsy5 transposaseQuickGO ontologyBLASTP
11940811194440360hypothetical proteinBLASTP
11950071195906900sefir domain proteinQuickGO ontologyBLASTP
119599311975821590lysogenic conversion proteinQuickGO ontologyBLASTP
119767511987031029RES domain-containing proteinQuickGO ontologyBLASTP
11987101199645936atp-binding proteinQuickGO ontologyBLASTP
11996471200552906bacteriophage proteinQuickGO ontologyBLASTP
12013341201693360hypothetical proteinBLASTP
12019271202331405hypothetical protein
12024301202759330hypothetical proteinBLASTP
1203240120332182tRNA-LeuQuickGO ontologyBLASTP
120343012044791050protein QueAQuickGO ontologyBLASTP
120447612056091134hypothetical proteinBLASTP
12056531205988336protein YajCQuickGO ontologyBLASTP
120605212079201869protein SecDQuickGO ontologyBLASTP
12079301208844915protein SecFQuickGO ontologyBLASTP
12089611209509549hypothetical proteinBLASTP
12097831210601819inositol-1-monophosphataseQuickGO ontologyBLASTP
12107461211516771tRNACm32Um32 methyltransferaseQuickGO ontologyBLASTP
12115181212294777Serine O-acetyltransferaseQuickGO ontologyBLASTP
12126221213074453protein IscRQuickGO ontologyBLASTP
121312512143391215protein IscSQuickGO ontologyBLASTP
12143831214769387protein IscUQuickGO ontologyBLASTP