Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:6589575 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
658957565908221248protein LysAQuickGO ontologyBLASTP
65908276591657831protein DapFQuickGO ontologyBLASTP
65916716592396726hypothetical proteinBLASTP
65923966593295900protein SssQuickGO ontologyBLASTP
659329265939967052-haloalkanoic acid dehalogenaseQuickGO ontologyBLASTP
65942006594523324hypothetical proteinBLASTP
65946266595051426hypothetical proteinBLASTP
659526465965621299protein AmtBQuickGO ontologyBLASTP
65966326596970339protein GlnKQuickGO ontologyBLASTP
65973866597646261hypothetical proteinBLASTP
65980016598528528hypothetical proteinBLASTP
65989086599348441hypothetical proteinBLASTP
659934566020472703atpase involved in chromosome partitioningQuickGO ontologyBLASTP
66020286602228201hypothetical proteinBLASTP
66022476602600354sensor histidine kinaseQuickGO ontologyBLASTP
66026726603031360ISPsy5 Orf1QuickGO ontologyBLASTP
660305966045821524ISPsy5 transposaseQuickGO ontologyBLASTP
66046136605572960integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
660583966073321494mg chelatase-related proteinQuickGO ontologyBLASTP
660733966085531215hypothetical proteinBLASTP
660879166107671977methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
66109536611873921LysR family transcriptional regulatorQuickGO ontologyBLASTP
661202666134261401Na-driven multidrug efflux pumpQuickGO ontologyBLASTP
661353566152051671GGDEF domainEAL domain proteinQuickGO ontologyBLASTP