Pre_GI: BLASTP Hits

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Query: NC_003911:3864852:3885158 Silicibacter pomeroyi DSS-3, complete genome

Start: 3885158, End: 3886303, Length: 1146

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:5684000:5707645570764557088021158Pseudomonas syringae pv. phaseolicola 1448A, complete genomeacetylornithine deacetylase (ArgE)1e-82306
NC_011283:1811000:1875052187505218762121161Klebsiella pneumoniae 342 chromosome, complete genomeacetylornithine deacetylase1e-78293
NC_007963:2644930:2676414267641426776221209Chromohalobacter salexigens DSM 3043, complete genomeacetylornithine deacetylase (ArgE)8e-77287
NC_008314:477722:5175305175305187051176Ralstonia eutropha H16 chromosome 2, complete sequenceacetylornithine deacetylase1e-75283
NC_011740:2859933:2882065288206528834021338Escherichia fergusonii ATCC 35469, complete genomeputative peptidic bond hydrolase9e-74277
NC_010512:1196616:1212286121228612134491164Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceacetylornithine deacetylase (ArgE)5e-73275
NC_010557:1030319:1031304103130410324761173Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceacetylornithine deacetylase (ArgE)2e-71270
NC_014323:3669704:3675217367521736764191203Herbaspirillum seropedicae SmR1 chromosome, complete genomeacetylornithine deacetylase4e-63241
NC_014643:892138:8921388921388935171380Rothia dentocariosa ATCC 17931 chromosome, complete genomeacetylornithine deacetylase8e-56218
NC_018643:857911:8887898887898899671179Alpha proteobacterium HIMB5 chromosome, complete genomeacetylornithine deacetylase ArgE2e-54213
NC_017253:31192:5105651056522011146Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase2e-43177
NC_017252:31215:5107751077522221146Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase2e-43176
NC_011834:31206:5107051070522151146Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase2e-43176
NC_017255:31211:5107551075522201146Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase3e-43176
NC_017254:31206:5107251072522171146Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase4e-43175
NC_016830:6499234:6517382651738265185391158Pseudomonas fluorescens F113 chromosome, complete genomeprotein ArgE5e-37155
NC_004061:31500:5116051160523051146Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeacetylornithine deacetylase7e-33141
NC_012912:4428111:4433351443335144345021152Dickeya zeae Ech1591, complete genomeacetylornithine deacetylase (ArgE)1e-30134
NC_007760:645016:6607006607006618151116Anaeromyxobacter dehalogenans 2CP-C, complete genomeacetylornithine deacetylase (ArgE)5e-23108
NC_004461:205068:2059622059622071791218Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein5e-22105
NC_020164:280087:2960722960722972921221Staphylococcus warneri SG1, complete genomesuccinyl-diaminopimelate desuccinylase7e-2098.6
NC_017353:361350:3887563887563899761221Staphylococcus lugdunensis N920143, complete genomeputative peptidase1e-1894.7
NC_011283:2684046:2705067270506727062091143Klebsiella pneumoniae 342 chromosome, complete genomepeptidase, ArgE/DapE family9e-1891.7
NC_013850:2685835:2709863270986327110051143Klebsiella variicola At-22 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1790.1
NC_010610:908452:9297219297219307821062Lactobacillus fermentum IFO 3956, complete genomepeptidase3e-1790.1
NC_016845:2691129:2693983269398326951251143Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative acetylornithine deacetylase3e-1790.1
NC_012731:2650603:2653466265346626546081143Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative acetylornithine deacetylase3e-1790.1
NC_009648:1914621:1917454191745419185961143Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative acetylornithine deacetylase3e-1790.1
NC_007940:1485006:1513443151344315146181176Rickettsia bellii RML369-C, complete genomeSuccinyl-diaminopimelate desuccinylase4e-1789.4
NC_009883:1492425:1520347152034715215221176Rickettsia bellii OSU 85-389, complete genomeSuccinyl-diaminopimelate desuccinylase8e-1788.6
NC_008321:2190000:2205418220541822065631146Shewanella sp. MR-4, complete genomesuccinyl-diaminopimelate desuccinylase1e-1687.8
NC_016070:719791:7271507271507283941245Thermoproteus tenax Kra 1, complete genomesuccinyl-diaminopimelate desuccinylase1e-1687.8
NC_019791:638500:6584156584156596501236Caldisphaera lagunensis DSM 15908 chromosome, complete genomeacetylornithine deacetylase/succinyl-diaminopimelate desuccinylase2e-1687
NC_013446:2655955:2679833267983326810141182Comamonas testosteroni CNB-2, complete genomesuccinyl-diaminopimelate desuccinylase7e-1685.5
NC_009033:133800:1402961402961415341239Staphylothermus marinus F1, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase1e-1584.7
NC_006300:600516:6280576280576291901134Mannheimia succiniciproducens MBEL55E, complete genomesuccinyl-diaminopimelate desuccinylase1e-1584.3
NC_013517:3846747:3849344384934438505971254Sebaldella termitidis ATCC 33386, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase2e-1583.6
NC_014961:490551:5049035049035061351233Desulfurococcus mucosus DSM 2162 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1583.6
NC_014205:622627:6405366405366417681233Staphylothermus hellenicus DSM 12710 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1583.6
NC_008544:818730:8373698373698386281260Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-1583.2
NC_009328:293000:3276293276293288581230Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein5e-1582.4
NC_012792:310443:3134073134073146751269Variovorax paradoxus S110 chromosome 2, complete genomepeptidase M205e-1582.4
NC_010531:428000:4452004452004463511152Polynucleobacter necessarius STIR1, complete genomesuccinyl-diaminopimelate desuccinylase6e-1582
NC_008700:1994829:2012345201234520134931149Shewanella amazonensis SB2B, complete genomesuccinyl-diaminopimelate desuccinylase7e-1582
NC_013315:2232339:2245359224535922465461188Clostridium difficile CD196 chromosome, complete genomepeptidase6e-1479
NC_013316:2309694:2325913232591323271001188Clostridium difficile R20291, complete genomeputative amidohydrolase6e-1479
NC_014624:287500:2888932888932900411149Eubacterium limosum KIST612 chromosome, complete genomeputative succinyl-diaminopimelate desuccinylase8e-1478.6
NC_009655:866281:8668698668698679991131Actinobacillus succinogenes 130Z chromosome, complete genomesuccinyl-diaminopimelate desuccinylase9e-1478.2
NC_010002:2293670:2312976231297623142681293Delftia acidovorans SPH-1, complete genomepeptidase dimerisation domain protein9e-1478.2
NC_015563:5162177:5163949516394951652411293Delftia sp. Cs1-4 chromosome, complete genomepeptidase M201e-1378.2
NC_014297:1:7895789591301236Halalkalicoccus jeotgali B3 chromosome, complete genomepeptidase M201e-1377.8
NC_004545:96422:9858998589997221134Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomesuccinyl-diaminopimelate desuccinylase1e-1377.8
NC_012791:2832001:2861987286198728631621176Variovorax paradoxus S110 chromosome 1, complete genomesuccinyl-diaminopimelate desuccinylase1e-1377.8
NC_020210:2133996:2197515219751521987711257Geobacillus sp. GHH01, complete genomeacetylornithine deacetylase3e-1376.6
NC_009051:1455183:1455183145518314563491167Methanoculleus marisnigri JR1, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1376.6
NC_010407:1114408:1134498113449811357361239Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative hydrolase2e-1376.6
NC_013315:3532721:3547141354714135483281188Clostridium difficile CD196 chromosome, complete genomepeptidase2e-1376.6
NC_017179:3540739:3555159355515935563461188Clostridium difficile BI1, complete genomepeptidase2e-1376.6
NC_008525:108687:1219901219901231411152Pediococcus pentosaceus ATCC 25745, complete genomeAcetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase4e-1376.3
NC_015761:2444833:2465547246554724666741128Salmonella bongori NCTC 12419, complete genomesuccinyl-diaminopimelate desuccinylase6e-1375.5
NC_011297:1167615:1184025118402511851221098Dictyoglomus thermophilum H-6-12, complete genomehypothetical protein7e-1375.5
NC_008278:5012000:5049068504906850502521185Frankia alni ACN14a, complete genomesuccinyl-diaminopimelate desuccinylase like7e-1375.5
NC_013959:1428381:1428381142838114295111131Sideroxydans lithotrophicus ES-1 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase9e-1375.1
NC_013961:2579000:2581127258112725822541128Erwinia amylovora, complete genomeN-succinyl-diaminopimelate deacylase8e-1375.1
NC_013971:2617000:2618655261865526197821128Erwinia amylovora ATCC 49946 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase8e-1375.1
NC_020409:560278:5602785602785614981221Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative enzyme1e-1274.7
NC_016943:4799915:4800953480095348020411089Blastococcus saxobsidens DD2, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase2e-1273.6
NC_012883:1283529:1299292129929213003441053Thermococcus sibiricus MM 739, complete genomeArgE/DapE-related deacylase3e-1273.2
NC_014299:218252:2305292305292318331305Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-1273.2
NC_013123:116465:1351471351471362261080Candidatus Sulcia muelleri SMDSEM, complete genomeputative acetylornithine deacetylase (ArgE)/succinyl-diaminopimelate desuccinylase (DapE)5e-1272.4
NC_019907:46994:5016650166513561191Liberibacter crescens BT-1 chromosome, complete genomeN-succinyl-L,L-diaminopimelate desuccinylase5e-1272.4
NC_016001:2421580:2431992243199224330621071Flavobacterium branchiophilum, complete genomeacetylornithine deacetylase1e-1171.2
NC_014364:111000:1216401216401228181179Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepeptidase M202e-1170.9
NC_012527:288207:3034573034573045901134Deinococcus deserti VCD115 plasmid 1, complete sequenceacetylornithine deacetylase3e-1170.1
NC_014774:239865:2408272408272419241098Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completesuccinyl-diaminopimelate desuccinylase3e-1169.7
NC_009634:759372:7629617629617642081248Methanococcus vannielii SB chromosome, complete genomediaminopimelate aminotransferase5e-1168.9
NC_014328:3294086:3302619330261933038031185Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative deacetylase6e-1168.9
NC_007645:5397526:5403120540312054042711152Hahella chejuensis KCTC 2396, complete genomesuccinyl-diaminopimelate desuccinylase7e-1168.6
NC_016510:1999621:2003676200367620047701095Flavobacterium columnare ATCC 49512 chromosome, complete genomepeptidase M201e-1068.2
NC_002516:1236644:1259291125929112604421152Pseudomonas aeruginosa PAO1, complete genomesuccinyl-diaminopimelate desuccinylase2e-1067.4
NC_021182:434351:4420504420504432341185Clostridium pasteurianum BC1, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase2e-1067.4
NC_009954:117895:1380351380351392761242Caldivirga maquilingensis IC-167, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1067
NC_013949:939695:9598689598689612051338Helicobacter mustelae 12198 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase3e-1066.6
NC_014761:1715377:1715377171537717164891113Oceanithermus profundus DSM 14977 chromosome, complete genomepeptidase m204e-1066.2
NC_007777:4597379:4619021461902146201001080Frankia sp. CcI3, complete genomesuccinyl-diaminopimelate desuccinylase4e-1066.2
NC_012985:465354:4804614804614816301170Candidatus Liberibacter asiaticus str. psy62, complete genomesuccinyl-diaminopimelate desuccinylase5e-1065.9
NC_009831:4447919:4455768445576844568741107Shewanella sediminis HAW-EB3, complete genometripeptidase T6e-1065.5
NC_015518:179938:1982971982971995111215Acidianus hospitalis W1 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase6e-1065.5
NC_010482:1540011:1541542154154215427471206Candidatus Korarchaeum cryptofilum OPF8, complete genomepeptidase M209e-1065.1
NC_013943:2547966:2565653256565325667621110Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomepeptidase M201e-0964.7
NC_014761:516981:5203675203675214911125Oceanithermus profundus DSM 14977 chromosome, complete genomepeptidase m201e-0964.3
NC_014039:708427:7196597196597207381080Propionibacterium acnes SK137 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase2e-0963.9
NC_016511:678582:6929536929536940321080Propionibacterium acnes TypeIA2 P.acn31 chromosome, completesuccinyl-diaminopimelate desuccinylase2e-0963.9
NC_016512:679688:6923386923386934171080Propionibacterium acnes TypeIA2 P.acn17 chromosome, completesuccinyl-diaminopimelate desuccinylase2e-0963.9
NC_014299:218252:2275232275232288241302Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-0963.5
NC_015172:237397:2451692451692462781110Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomepeptidase T-like protein3e-0963.2
NC_013093:832971:8542838542838553621080Actinosynnema mirum DSM 43827, complete genomesuccinyl-diaminopimelate desuccinylase3e-0963.2
NC_013926:183057:1830571830571840821026Aciduliprofundum boonei T469 chromosome, complete genomepeptidase M204e-0962.8
NC_013939:1841890:1865401186540118665191119Deferribacter desulfuricans SSM1, complete genomecarboxypeptidase G26e-0962.4
NC_009439:3394174:3393035339303533941771143Pseudomonas mendocina ymp, complete genomesuccinyl-diaminopimelate desuccinylase6e-0962.4
NC_009616:99647:1197611197611209661206Thermosipho melanesiensis BI429 chromosome, complete genomepeptidase5e-0962.4
NC_009468:38112:6181861818631281311Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequenceacetylornithine deacetylase5e-0962.4
NC_019978:1022209:1029430102943010306291200Halobacteroides halobius DSM 5150, complete genomeM20/DapE family protein YgeY/putative selenium metabolism hydrolase7e-0962
NC_014299:218252:2356422356422369791338Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase8e-0961.6
NC_008571:2229369:2228302222830222293721071Gramella forsetii KT0803, complete genomeacetylornithine deacetylase9e-0961.6
NC_013410:89811:1117261117261130991374Fibrobacter succinogenes subsp. succinogenes S85 chromosome,peptidase M209e-0961.6
NC_010085:1174917:1186038118603811871651128Nitrosopumilus maritimus SCM1, complete genomeN-acetyl-ornithine/N-acetyl-lysine deacetylase9e-0961.6
NC_020075:637420:6395976395976407511155Candidatus Blochmannia chromaiodes str. 640, complete genomesuccinyl-diaminopimelate desuccinylase1e-0861.2
NC_011653:331986:3486273486273498381212Thermosipho africanus TCF52B, complete genomeM20/DapE family protein YgeY2e-0860.5
NC_015385:965341:9698619698619710901230Treponema succinifaciens DSM 2489 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-0860.5
NC_012658:3126108:3141260314126031424771218Clostridium botulinum Ba4 str. 657 chromosome, complete genomepeptidase2e-0860.5
NC_012563:3288124:3303558330355833047751218Clostridium botulinum A2 str. Kyoto, complete genomepeptidase, M20/M25/M40 family2e-0860.1
NC_009698:2921097:2936450293645029376671218Clostridium botulinum A str. Hall chromosome, complete genomepeptidase3e-0860.1
NC_009697:2984173:2999526299952630007431218Clostridium botulinum A str. ATCC 19397 chromosome, completepeptidase3e-0860.1
NC_009495:3051223:3066576306657630677931218Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepeptidase3e-0860.1
NC_015496:2436089:2459273245927324603431071Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomepeptidase M203e-0859.7
NC_010520:3120500:3136925313692531381421218Clostridium botulinum A3 str. Loch Maree, complete genomepeptidase, M20/M25/M40 family4e-0859.7
NC_014150:2399997:2408492240849224097601269Brachyspira murdochii DSM 12563 chromosome, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase7e-0858.9
NC_020064:3157656:3175966317596631773811416Serratia marcescens FGI94, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase7e-0858.5
NC_009142:2480608:2485190248519024865451356Saccharopolyspora erythraea NRRL 2338, complete genomeArgE/DapE/Acy1/Cpg2/yscS family1e-0758.2
NC_008701:1259000:1263371126337112643781008Pyrobaculum islandicum DSM 4184, complete genomeN-acetyl-ornithine/N-acetyl-lysine deacetylase1e-0757.8
NC_015389:1070500:1099083109908311002161134Coriobacterium glomerans PW2 chromosome, complete genomepeptidase M201e-0757.8
NC_013174:1254874:1270234127023412715531320Jonesia denitrificans DSM 20603, complete genomepeptidase M202e-0757
NC_010525:1314999:1315805131580513170041200Thermoproteus neutrophilus V24Sta, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-0756.2
NC_008043:86470:8848288482896691188Silicibacter sp. TM1040 mega plasmid, complete sequencepeptidase M204e-0756.2
NC_015276:855150:8677408677408689691230Marinomonas mediterranea MMB-1 chromosome, complete genomepeptidase dimerization domain protein1e-0654.7
NC_014654:2311818:2323898232389823251361239Halanaerobium sp. 'sapolanicus' chromosome, complete genomeM20/DapE family protein YgeY2e-0654.3
NC_014221:2943950:2961082296108229622361155Truepera radiovictrix DSM 17093 chromosome, complete genomepeptidase M202e-0654.3
NC_016070:719791:7225897225897237821194Thermoproteus tenax Kra 1, complete genomesuccinyl-diaminopimelate desuccinylase1e-0654.3
NC_009077:3323291:3328321332832133296551335Mycobacterium sp. JLS, complete genomepeptidase M202e-0653.9
NC_008146:3349415:3354445335444533557791335Mycobacterium sp. MCS, complete genomepeptidase M202e-0653.9
NC_008705:3377697:3382727338272733840611335Mycobacterium sp. KMS, complete genomepeptidase M202e-0653.9
NC_013791:2839516:2846371284637128474891119Bacillus pseudofirmus OF4 chromosome, complete genomepeptidase T3e-0653.1
NC_013159:2098500:2126157212615721274611305Saccharomonospora viridis DSM 43017, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase3e-0653.1
NC_015177:2271499:2273139227313922745841446Pedobacter saltans DSM 12145 chromosome, complete genomepeptidase M205e-0652.8
AC_000091:2976293:3007420300742030086311212Escherichia coli W3110 DNA, complete genomepredicted peptidase5e-0652.8
NC_011750:3407500:3436050343605034372611212Escherichia coli IAI39 chromosome, complete genomepeptidase5e-0652.8
NC_012759:2862807:2893934289393428951451212Escherichia coli BW2952 chromosome, complete genomepeptidase5e-0652.8
CU928160:3030324:3067020306702030682311212Escherichia coli IAI1 chromosome, complete genomeputative peptidase6e-0652.4
CP002185:3167738:3205813320581332070241212Escherichia coli W, complete genomepredicted peptidase6e-0652.4
NC_011741:3030324:3067020306702030682311212Escherichia coli IAI1 chromosome, complete genomepeptidase6e-0652.4
NC_013364:3552284:3588989358898935902001212Escherichia coli O111:H- str. 11128, complete genomeputative peptidase6e-0652.4
NC_018867:2063741:2081910208191020830161107Dehalobacter sp. CF chromosome, complete genomedi- and tripeptidase5e-0652.4
NC_018866:2033960:2052129205212920532351107Dehalobacter sp. DCA chromosome, complete genomedi- and tripeptidase5e-0652.4
NC_014206:1202907:1221854122185412229781125Geobacillus sp. C56-T3 chromosome, complete genomepeptidase T-like protein7e-0652
NC_014820:71565:1003621003621014441083Cenarchaeum symbiosum A, complete genomeacetylornithine deacetylase/succinyl-diaminopimelate desuccinylase7e-0652
NC_016051:1471782:1484477148447714856371161Thermococcus sp. AM4 chromosome, complete genomeacetylornithine deacetylase9e-0651.6