Pre_GI Gene

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Host: NC_008525 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008525:108687 Pediococcus pentosaceus ATCC 25745, complete genome

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
108687109649963Diacylglycerol kinase family proteinQuickGO ontologyBLASTP
109733110560828alphabeta hydrolase superfamily proteinQuickGO ontologyBLASTP
110656110976321Thiol-disulfide isomerase and thioredoxinQuickGO ontologyBLASTP
111311112117807C-di-GMP-specific phosphodiesteraseQuickGO ontologyBLASTP
112119112622504hypothetical proteinBLASTP
1126321139571326GlycosyltransferaseQuickGO ontologyBLASTP
1140931155291437Beta-glucosidase6-phospho-beta- glucosidasebeta-galactosidaseQuickGO ontologyBLASTP
115638116438801Histidinol phosphatase related hydrolase of the PHP familyQuickGO ontologyBLASTP
116896118475158016S ribosomal RNAQuickGO ontologyBLASTP
118704121626292323S ribosomal RNAQuickGO ontologyBLASTP
1217201218361175S ribosomal RNAQuickGO ontologyBLASTP
1219901231411152Acetylornithine deacetylaseSuccinyl-diaminopimelate desuccinylase related deacylaseQuickGO ontologyBLASTP
1233211243371017Predicted oxidoreductase aryl-alcohol dehydrogenase relatedQuickGO ontologyBLASTP
1243891255611173GalactokinaseQuickGO ontologyBLASTP
125793126374582RpoE DNA-directed RNA polymerase specialized sigma subunit sigma24-likeQuickGO ontologyBLASTP
126609126827219hypothetical protein
127386127526141hypothetical protein
1280091330395031hypothetical proteinBLASTP
1334261424799054Adhesion exoproteinQuickGO ontologyBLASTP
142598143326729AraC-type DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
144335144580246hypothetical proteinBLASTP