Pre_GI: BLASTP Hits

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Query: NC_003198:3586000:3600451 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3600451, End: 3601233, Length: 783

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:4119332:412364941236494124500852Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCglutamate racemase7e-149526
NC_010468:4455201:446578944657894466577789Escherichia coli ATCC 8739, complete genomeglutamate racemase5e-132470
NC_010473:4256000:426314842631484264005858Escherichia coli str. K-12 substr. DH10B, complete genomeglutamate racemase7e-132469
NC_000913:4159090:416345141634514164308858Escherichia coli K12, complete genomeglutamate racemase7e-132469
CU928160:4248621:425465942546594255516858Escherichia coli IAI1 chromosome, complete genomeglutamate racemase7e-131466
NC_009648:4656187:466218346621834662965783Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeglutamate racemase2e-130464
NC_005810:3493607:349981934998193500682864Yersinia pestis biovar Microtus str. 91001, complete genomeglutamate racemase9e-111399
NC_008309:1628939:164593516459351646738804Haemophilus somnus 129PT, complete genomeglutamate racemase5e-66251
NC_011184:2723000:274010627401062740891786Vibrio fischeri MJ11 chromosome I, complete sequenceglutamate racemase1e-60233
NC_014909:662500:679702679702680547846Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeglutamate racemase6e-57220
NC_019907:539749:567518567518568351834Liberibacter crescens BT-1 chromosome, complete genomeglutamate racemase8e-41167
NC_015410:1202370:122743312274331228248816Pseudomonas mendocina NK-01 chromosome, complete genomeglutamate racemase5e-36151
NC_020209:47504:117941117941118735795Pseudomonas poae RE*1-1-14, complete genomeglutamate racemase6e-36150
NC_012660:819381:841697841697842491795Pseudomonas fluorescens SBW25 chromosome, complete genomeglutamate racemase7e-36150
NC_009434:3413461:342588634258863426680795Pseudomonas stutzeri A1501, complete genomeglutamate racemase2e-35149
NC_009613:2353185:236321923632192363998780Flavobacterium psychrophilum JIP02/86, complete genomeglutamate racemase4e-35148
NC_008027:896000:914730914730915527798Pseudomonas entomophila L48, complete genomeglutamate racemase8e-34144
NC_015161:2060369:2080000208000020810971098Deinococcus proteolyticus MRP chromosome, complete genomeGlutamate racemase2e-32139
NC_013851:759500:771805771805772653849Allochromatium vinosum DSM 180 chromosome, complete genomeglutamate racemase8e-30130
NC_008390:2448379:246933624693362470199864Burkholderia cepacia AMMD chromosome 1, complete sequenceglutamate racemase1e-28127
NC_015276:2171355:217758421775842178414831Marinomonas mediterranea MMB-1 chromosome, complete genomeGlutamate racemase1e-27123
NC_010424:1563033:159117515911751591996822Candidatus Desulforudis audaxviator MP104C, complete genomeglutamate racemase2e-27122
NC_013959:83992:102149102149102955807Sideroxydans lithotrophicus ES-1 chromosome, complete genomeglutamate racemase8e-27120
NC_010524:2761394:276914927691492769967819Leptothrix cholodnii SP-6, complete genomeglutamate racemase2e-26119
NC_018870:427357:427357427357428238882Thermacetogenium phaeum DSM 12270 chromosome, complete genomeglutamate racemase MurI2e-26119
NC_006322:2851215:286963428696342870452819Bacillus licheniformis ATCC 14580, complete genomeRacE6e-26117
NC_006270:2850354:286942128694212870236816Bacillus licheniformis ATCC 14580, complete genomeglutamate racemase5e-26117
NC_010376:606000:609188609188609973786Finegoldia magna ATCC 29328, complete genomeglutamate racemase3e-25115
NC_012659:4273606:429097242909724291781810Bacillus anthracis str. A0248, complete genomeglutamate racemase9e-25114
NC_003997:4273579:429094542909454291754810Bacillus anthracis str. Ames, complete genomeglutamate racemase9e-25114
NC_015856:3912195:391444439144443915316873Collimonas fungivorans Ter331 chromosome, complete genomeglutamate racemase1e-24113
NC_016830:530397:540835540835541713879Pseudomonas fluorescens F113 chromosome, complete genomeputative glutamate racemase1e-24113
NC_014171:4317520:435183043518304352639810Bacillus thuringiensis BMB171 chromosome, complete genomeglutamate racemase3e-24112
NC_013166:194614:196632196632197450819Kangiella koreensis DSM 16069, complete genomeglutamate racemase6e-24111
NC_016803:2431672:243302724330272433866840Desulfovibrio desulfuricans ND132 chromosome, complete genomeglutamate racemase7e-24110
NC_016641:373623:394657394657395442786Paenibacillus terrae HPL-003 chromosome, complete genomeglutamate racemase7e-24110
NC_009659:997779:998489998489999343855Janthinobacterium sp. Marseille chromosome, complete genomeglutamate racemase9e-23107
NC_010322:6037566:604850760485076049397891Pseudomonas putida GB-1 chromosome, complete genomeglutamate racemase1e-22107
NC_011244:94756:109627109627110391765Borrelia recurrentis A1, complete genomeglutamate racemase1e-22106
NC_008599:596849:600434600434601195762Campylobacter fetus subsp. fetus 82-40, complete genomeglutamate racemase1e-22106
NC_014393:4646000:466042546604254661204780Clostridium cellulovorans 743B chromosome, complete genomeglutamate racemase2e-22106
NC_008555:1204000:120467812046781205478801Listeria welshimeri serovar 6b str. SLCC5334, complete genomeglutamate racemase4e-22105
NC_010673:82586:974679746798231765Borrelia hermsii DAH, complete genomeglutamate racemase4e-22105
NC_019896:1483073:148786214878621488662801Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlutamate racemase 23e-22105
NC_014376:597000:597062597062597880819Clostridium saccharolyticum WM1 chromosome, complete genomeglutamate racemase3e-22105
NC_013791:579842:597334597334598143810Bacillus pseudofirmus OF4 chromosome, complete genomeglutamate racemase1e-21103
NC_018515:4442500:445272544527254453621897Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeglutamate racemase4e-21101
NC_014392:1935130:194685719468571947660804Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeglutamate racemase1e-20100
NC_014633:583858:600692600692601477786Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceglutamate racemase2e-1996.7
NC_008710:79100:973919739198155765Borrelia turicatae 91E135, complete genomeglutamate racemase2e-1996.3
NC_014363:427393:450556450556451329774Olsenella uli DSM 7084 chromosome, complete genomeglutamate racemase3e-1995.5
NC_013406:5020690:503404850340485034824777Paenibacillus sp. Y412MC10 chromosome, complete genomeglutamate racemase5e-1994.7
NC_010545:1691999:171368817136881714554867Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein6e-1994.7
NC_018664:159291:161074161074161889816Clostridium acidurici 9a chromosome, complete genomeglutamate racemase MurI2e-1892.8
NC_017328:2586171:259711025971102597931822Shigella flexneri 2002017 chromosome, complete genomeglutamate racemase3e-1892.4
NC_004337:2548288:255947225594722560293822Shigella flexneri 2a str. 301, complete genomesimilar to glutamate racemase3e-1892.4
NC_015389:1610756:163012616301261631055930Coriobacterium glomerans PW2 chromosome, complete genomeglutamate racemase3e-1892
NC_012039:53497:666316663167371741Campylobacter lari RM2100, complete genomeglutamate racemase1e-1790.1
NC_013740:15401:359193591936713795Acidaminococcus fermentans DSM 20731, complete genomeglutamate racemase4e-1788.6
NC_014039:1766049:178250317825031783357855Propionibacterium acnes SK137 chromosome, complete genomeglutamate racemase8e-1787.4
NC_018750:770500:793584793584794378795Streptomyces venezuelae ATCC 10712, complete genomeGlutamate racemase2e-1686.7
NC_014816:2446236:245375924537592454613855Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceglutamate racemase2e-1686.3
NC_016516:1751336:177136317713631772217855Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeglutamate racemase2e-1686.3
NC_014153:2187409:220763422076342208425792Thiomonas intermedia K12 chromosome, complete genomeglutamate racemase2e-1686.3
NC_015177:2271499:228643022864302287242813Pedobacter saltans DSM 12145 chromosome, complete genomeglutamate racemase8e-1580.9
NC_017063:775337:780539780539781306768Helicobacter pylori ELS37 chromosome, complete genomeglutamate racemase5e-1478.2
NC_014256:683384:721382721382722149768Helicobacter pylori B8 chromosome, complete genomeglutamate racemase1e-1377.4
NC_014666:7152782:7154964715496471559951032Frankia sp. EuI1c chromosome, complete genomeglutamate racemase3e-1375.9
NC_011297:1167615:118510611851061185906801Dictyoglomus thermophilum H-6-12, complete genomeglutamate racemase3e-1168.9
NC_017195:2498113:253666625366662537259594Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeglutamate racemase1e-0963.9
NC_008258:2542863:255407825540782554770693Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-0963.2