Pre_GI: BLASTP Hits

Some Help

Query: NC_002947:4994335:5023079 Pseudomonas putida KT2440, complete genome

Start: 5023079, End: 5023933, Length: 855

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:331610:333286333286334143858Pseudomonas putida ND6 chromosome, complete genomeABC transporter periplasmic protein8e-124443
NC_013960:2761353:277059627705962771510915Nitrosococcus halophilus Nc4 chromosome, complete genomeectoine/hydroxyectoine ABC transporter solute-binding protein2e-67255
NC_009328:2378345:239928923992892400155867Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter2e-62239
NC_004193:375416:590982590982591848867Oceanobacillus iheyensis HTE831, complete genomeABC transporter2e-49196
NC_008541:1931266:195269519526951953588894Arthrobacter sp. FB24 chromosome 1, complete sequenceextracellular solute-binding protein9e-43174
NC_013943:124500:142936142936143790855Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeectoine/hydroxyectoine ABC transporter substrate-binding protein1e-38159
NC_005773:2641715:264389426438942644766873Pseudomonas syringae pv. phaseolicola 1448A, complete genomeABC transporter binding protein-like protein AabH5e-37154
NC_007712:1791766:181582618158261816557732Sodalis glossinidius str. 'morsitans', complete genomearginine ABC transporter periplasmic component6e-1478.2
NC_020409:512861:522995522995523867873Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeExtracellular solute-binding protein family 31e-1377
NC_009256:458649:480091480091480891801Burkholderia vietnamiensis G4 chromosome 1, complete sequenceextracellular solute-binding protein5e-1375.1
NC_014923:5940500:594092259409225941269348Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeextracellular solute-binding protein family 39e-1374.3
NC_015675:6493444:649559364955936495940348Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 3 extracellular solute-binding protein9e-1374.3
NC_019973:5869500:586988258698825870229348Mesorhizobium australicum WSM2073, complete genomeperiplasmic component of amino acid ABC-type transporter/signal transduction system9e-1374.3
NC_020291:2218425:222884522288452229696852Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid ABC transporter substrate-binding protein, PAAT family1e-1273.9
NC_010551:415487:429248429248430048801Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceextracellular solute-binding protein family 32e-1273.6
NC_007510:409843:409843409843410643801Burkholderia sp. 383 chromosome 1, complete sequenceABC amino acid transporter, periplasmic ligand binding protein2e-1272.8
NC_008060:2913671:292018429201842920984801Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-1272.8
NC_008542:483761:504205504205505005801Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-1272.8
NC_010508:451184:465275465275466075801Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceextracellular solute-binding protein family 32e-1272.8
NC_012668:1623350:162429916242991625081783Vibrio cholerae MJ-1236 chromosome 1, complete sequenceamino acid ABC transporter substrate-binding protein2e-1272.8
NC_007622:2399347:242361524236152424394780Staphylococcus aureus RF122, complete genomeextracellular amino acid binding ABC transporter4e-1272.4
NC_015672:1921023:192553519255351926362828Flexistipes sinusarabici DSM 4947 chromosome, complete genomeABC transporter periplasmic subunit family 34e-1272
NC_004129:2609189:263173026317302632518789Pseudomonas fluorescens Pf-5, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein4e-1272
NC_014098:2971011:297631029763102977149840Bacillus tusciae DSM 2912 chromosome, complete genomeextracellular solute-binding protein family 32e-1169.7
NC_016002:2037374:207232620723262073093768Pseudogulbenkiania sp. NH8B, complete genomecationic amino acid ABC transporter periplasmic binding protein4e-1168.9
NC_002163:687925:687925687925688680756Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehistidine-binding protein precursor5e-1168.6
NC_007963:3113739:312316631231663123933768Chromohalobacter salexigens DSM 3043, complete genomeextracellular solute-binding protein, family 36e-1168.2
NC_009480:2932108:295235329523532953201849Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative polar amino acid ABC transporter,substrate-binding protein8e-1167.8
NC_007796:31691:490514905149881831Methanospirillum hungatei JF-1, complete genomeextracellular solute-binding protein, family 31e-1067
NC_004557:558500:576911576911577729819Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein1e-1067
NC_009617:3360990:337445433744543375317864Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular solute-binding protein2e-1067
NC_008800:2695977:271113927111392711939801Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cystine transporter subunit2e-1066.6
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit3e-1065.9
NC_013202:1620753:162075316207531621529777Halomicrobium mukohataei DSM 12286, complete genomeextracellular solute-binding protein family 38e-1064.3
NC_020300:675551:695690695690696442753Bartonella australis Aust/NH1, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-0964.3
NC_020064:1611820:163286516328651633599735Serratia marcescens FGI94, complete genomeL-arginine-binding protein1e-0963.9
NC_008309:190550:214337214337215119783Haemophilus somnus 129PT, complete genomeamino acid ABC transporter, substrate-binding2e-0963.5
NC_010519:71365:909109091091692783Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein2e-0963.5
NC_007651:1726472:174854917485491749349801Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid ABC transporter, periplasmic amino acid-binding protein3e-0962.8
NC_013416:668152:696613696613697332720Aggregatibacter actinomycetemcomitans D11S-1, complete genomearginine-binding periplasmic protein 13e-0962.4
NC_014222:1188719:120948412094841210269786Methanococcus voltae A3 chromosome, complete genomeextracellular solute-binding protein family 33e-0962.4
NC_014011:1264165:127374912737491274525777Aminobacterium colombiense DSM 12261 chromosome, complete genomeextracellular solute-binding protein family 34e-0962
NC_010694:2492378:249237824923782493124747Erwinia tasmaniensis, complete genomeGlutamine high-affinity transporter5e-0962
NC_016513:974402:100337110033711004090720Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completearginine-binding periplasmic protein 15e-0961.6
NC_014844:2158318:216206621620662162935870Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 3 extracellular solute-binding protein6e-0961.6
NC_015061:3725921:374016937401693740948780Rahnella sp. Y9602 chromosome, complete genomecationic amino acid ABC transporter periplasmic binding protein8e-0961.2
NC_017047:3793000:380483038048303805609780Rahnella aquatilis HX2 chromosome, complete genomecationic amino acid ABC transporter periplasmic binding protein8e-0961.2
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein7e-0961.2
NC_009255:351695:366686366686367468783Burkholderia vietnamiensis G4 chromosome 2, complete sequencecationic amino acid ABC transporter, periplasmic binding protein9e-0960.8
NC_009436:2685910:270448927044892705289801Enterobacter sp. 638, complete genomecystine transporter subunit1e-0860.5
NC_014729:800892:815328815328816230903Halogeometricum borinquense DSM 11551 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, paat family1e-0860.5
NC_015379:3736500:374481737448173745542726Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative amino acid ABC transporter, periplasmic component1e-0860.5
NC_016830:3230939:324760132476013248326726Pseudomonas fluorescens F113 chromosome, complete genomeLysine-arginine-ornithine-binding periplasmic protein1e-0860.5
NC_008786:3323167:336572933657293366469741Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 31e-0860.5
NC_002927:2636694:265544826554482656236789Bordetella bronchiseptica RB50, complete genomeputative amino-acid ABC transporter, periplasmic amino acid-binding protein1e-0860.5
NC_004129:2440744:245660824566082457360753Pseudomonas fluorescens Pf-5, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein2e-0860.1
NC_016514:2950860:295757829575782958378801Enterobacter cloacae EcWSU1 chromosome, complete genomecystine-binding periplasmic protein2e-0859.7
NC_018643:641360:655629655629656396768Alpha proteobacterium HIMB5 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family3e-0859.7
NC_007512:1162949:1184174118417411871462973Pelodictyon luteolum DSM 273, complete genomeAmino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine4e-0858.9
NC_012691:1743038:174678317467831747562780Tolumonas auensis DSM 9187, complete genomecationic amino acid ABC transporter, periplasmic binding protein4e-0858.9
NC_007512:944941:9784109784109813822973Pelodictyon luteolum DSM 273, complete genomeAmino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine5e-0858.5
NC_008027:5576458:557558955755895576461873Pseudomonas entomophila L48, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein7e-0858.2
CP002797:4775780:479209547920954792841747Escherichia coli NA114, complete genomeGlutamine ABC transporter, periplasmic glutamine-binding protein7e-0858.2
NC_008027:5533311:553409655340965534857762Pseudomonas entomophila L48, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein7e-0858.2
NC_014377:1546124:154975815497581550594837Thermosediminibacter oceani DSM 16646 chromosome, complete genomeextracellular solute-binding protein family 36e-0858.2
NC_014838:254322:273044273044273814771Pantoea sp. At-9b plasmid pPAT9B01, complete sequencefamily 3 extracellular solute-binding protein9e-0857.8
NC_016816:1912366:194686119468611947661801Pantoea ananatis LMG 5342, complete genomeABC transporter substrate-binding protein9e-0857.8
NC_008011:924392:939981939981940730750Lawsonia intracellularis PHE/MN1-00, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain9e-0857.8
NC_013421:3117639:313823231382323138978747Pectobacterium wasabiae WPP163, complete genomecationic amino acid ABC transporter, periplasmic binding protein1e-0757.8
NC_009049:2131017:213514021351402135865726Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-0757
NC_004578:6089958:609074660907466091510765Pseudomonas syringae pv. tomato str. DC3000, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-0757
NC_012779:3570720:358037735803773581147771Edwardsiella ictaluri 93-146, complete genomeputative ABC transporter, perplasmic amino acid binding protein1e-0757
NC_014306:3210311:324552832455283246325798Erwinia billingiae Eb661, complete genomelysine/arginine/ornithine ABC transporter, periplasmic ligand binding protein2e-0756.6
NC_014837:2803447:280880128088012809598798Pantoea sp. At-9b chromosome, complete genomecationic amino acid ABC transporter periplasmic-binding protein2e-0756.6
NC_007963:3113739:311596431159643116803840Chromohalobacter salexigens DSM 3043, complete genomeextracellular solute-binding protein, family 32e-0756.2
NC_007512:1162949:118339511833951184177783Pelodictyon luteolum DSM 273, complete genomeABC-type amino acid transport/signal transduction systems periplasmic component/domain-like2e-0756.2
NC_007512:944941:977631977631978413783Pelodictyon luteolum DSM 273, complete genomeABC-type amino acid transport/signal transduction systems periplasmic component/domain-like3e-0756.2
NC_011884:3302500:332206433220643322978915Cyanothece sp. PCC 7425, complete genomeextracellular solute-binding protein family 34e-0755.8
NC_012660:5242392:524577452457745246559786Pseudomonas fluorescens SBW25 chromosome, complete genomeputative histidine-binding periplasmic protein3e-0755.8
NC_016051:1471782:148883514888351489596762Thermococcus sp. AM4 chromosome, complete genomeglutamine ABC transporter periplasmic glutamine-binding protein4e-0755.5
NC_007907:5297477:531783553178355318665831Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0755.1
NC_010694:1502019:152486015248601525654795Erwinia tasmaniensis, complete genomeABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein6e-0755.1
NC_007645:3870466:388925938892593890059801Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain6e-0755.1
NC_014150:2088012:211820221182022118945744Brachyspira murdochii DSM 12563 chromosome, complete genomeextracellular solute-binding protein family 36e-0755.1
NC_015276:1426000:1434519143451914362521734Marinomonas mediterranea MMB-1 chromosome, complete genomehistidine kinase8e-0754.7
NC_012881:3004784:303306830330683033856789Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 38e-0754.7
NC_018528:697553:718331718331719191861Lactobacillus helveticus R0052 chromosome, complete genomeABC superfamily ATP binding cassette transporter, binding protein7e-0754.7
NC_008577:1015419:102816310281631028897735Shewanella sp. ANA-3 chromosome 1, complete sequenceextracellular solute-binding protein, family 37e-0754.7
NC_015555:693461:693461693461694237777Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, periplasmic subunit family 38e-0754.3
NC_009668:46010:635246352464384861Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceextracellular solute-binding protein1e-0654.3
NC_014410:2149886:217043421704342171210777Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 31e-0654.3
NC_015379:6226661:6228660622866062323793720Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative diguanylate cyclase/phosphodiesterase1e-0654.3
NC_011830:4031901:403190140319014032746846Desulfitobacterium hafniense DCB-2, complete genomeextracellular solute-binding protein family 31e-0653.9
NC_015183:2483653:248568624856862486480795Agrobacterium sp. H13-3 chromosome, complete genomenopaline ABC transporter substrate-binding protein1e-0653.9
NC_013956:2749685:275335827533582754155798Pantoea ananatis LMG 20103 chromosome, complete genomeArgT2e-0653.5
NC_016816:1676460:170492017049201705717798Pantoea ananatis LMG 5342, complete genomecationic amino acid ABC transporter substrate-binding protein2e-0653.5
NC_007907:2995889:300037030003703001215846Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0653.5
NC_011740:2859933:287516428751642875994831Escherichia fergusonii ATCC 35469, complete genomeputative bacterial extracellular solute-binding protein, family 32e-0653.1
NC_014165:374674:375504375504376352849Thermobispora bispora DSM 43833 chromosome, complete genomeextracellular solute-binding protein family 32e-0653.1
NC_012125:1897611:190630719063071907077771Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0653.1
NC_009439:4661102:467391946739194674671753Pseudomonas mendocina ymp, complete genomeextracellular solute-binding protein2e-0653.1
NC_010102:1137247:114626611462661147036771Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0653.1
NC_015978:1266196:128338612833861284177792Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeABC transporter glutamine-binding protein glnH2e-0653.1
NC_009832:2596344:261880026188002619573774Serratia proteamaculans 568, complete genomeextracellular solute-binding protein family 32e-0653.1
NC_013947:613774:622409622409623227819Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeextracellular solute-binding protein family 32e-0653.1
NC_006511:1063249:107229210722921073062771Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-0653.1
NC_011147:1057259:106630210663021067072771Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0653.1
NC_014622:5553628:555362855536285554437810Paenibacillus polymyxa SC2 chromosome, complete genomeamino acid ABC transporter amino acid-binding protein/permease, his/glu/gln/arg/opine family3e-0652.8
NC_014973:3414459:341797734179773418771795Geobacter sp. M18 chromosome, complete genomefamily 3 extracellular solute-binding protein3e-0652.8
NC_010163:1361217:138145413814541382242789Acholeplasma laidlawii PG-8A chromosome, complete genomeABC transporter substrate-binding protein3e-0652.8
NC_015320:743983:761388761388762212825Archaeoglobus veneficus SNP6 chromosome, complete genomeABC transporter periplasmic subunit family 33e-0652.4
NC_017986:2985514:300434230043423005094753Pseudomonas putida ND6 chromosome, complete genomeextracellular solute-binding protein4e-0652.4
NC_008786:1767315:178684417868441787620777Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 34e-0652
NC_010501:5442000:544314554431455443897753Pseudomonas putida W619, complete genomeextracellular solute-binding protein family 37e-0651.6
NC_012880:3645304:364746736474673648303837Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 36e-0651.6
NC_014562:2049921:205326920532692054060792Pantoea vagans C9-1 chromosome, complete genomePutative ABC transport system, periplasmic solute-binding protein precursor6e-0651.6
NC_009848:354202:378793378793379608816Bacillus pumilus SAFR-032, complete genomeL-cystine ABC transporter substrate-binding protein6e-0651.6
NC_008262:654000:676152676152676988837Clostridium perfringens SM101, complete genomeamino acid ABC transporter7e-0651.2
NC_003366:728859:750652750652751488837Clostridium perfringens str. 13, complete genomeprobable amino acid ABC transporter8e-0651.2
NC_008261:676000:697962697962698798837Clostridium perfringens ATCC 13124, complete genomeamino acid ABC transporter, amino acid-binding protein8e-0651.2
NC_009439:4404942:4406940440694044106743735Pseudomonas mendocina ymp, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)9e-0651.2
NC_011094:688626:689969689969690739771Salmonella enterica subsp. enterica serovar Schwarzengrund strpolar amino acid ABC transporter substrate-binding protein9e-0650.8