Pre_GI Gene

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Host: NC_009480 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009480:2932108 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29315092932111603adenylate kinaseQuickGO ontologyBLASTP
293210829334301323preprotein translocase subunit SecYQuickGO ontologyBLASTP
2933556293413457950S ribosomal protein L15QuickGO ontologyBLASTP
2934134293431618350S ribosomal protein L30QuickGO ontologyBLASTP
2934316293498166630S ribosomal protein S5QuickGO ontologyBLASTP
2935017293538837250S ribosomal protein L18QuickGO ontologyBLASTP
2935391293592753750S ribosomal protein L6QuickGO ontologyBLASTP
2935932293633039930S ribosomal protein S8QuickGO ontologyBLASTP
2936468293706459750S ribosomal protein L5QuickGO ontologyBLASTP
2937067293742636050S ribosomal protein L24QuickGO ontologyBLASTP
2937429293779736950S ribosomal protein L14QuickGO ontologyBLASTP
2937825293812129730S ribosomal protein S17QuickGO ontologyBLASTP
2938124293845032750S ribosomal protein L29QuickGO ontologyBLASTP
2938450293886942050S ribosomal protein L16QuickGO ontologyBLASTP
2938872293966979830S ribosomal protein S3QuickGO ontologyBLASTP
2939669294006139350S ribosomal protein L22QuickGO ontologyBLASTP
2940087294036828230S ribosomal protein S19QuickGO ontologyBLASTP
2940381294122084050S ribosomal protein L2QuickGO ontologyBLASTP
2941243294154230050S ribosomal protein L23QuickGO ontologyBLASTP
2941539294219565750S ribosomal protein L4QuickGO ontologyBLASTP
2942198294285165450S ribosomal protein L3QuickGO ontologyBLASTP
2942860294316830930S ribosomal protein S10QuickGO ontologyBLASTP
29436092944577969putative topoisomerase IBQuickGO ontologyBLASTP
294472729459201194elongation factor TuQuickGO ontologyBLASTP
294603429481482115elongation factor GQuickGO ontologyBLASTP
2948196294866647130S ribosomal protein S7QuickGO ontologyBLASTP
2948666294904037530S ribosomal protein S12QuickGO ontologyBLASTP
29493062949731426hypothetical membrane proteinQuickGO ontologyBLASTP
29497512950743993hypothetical membrane proteinQuickGO ontologyBLASTP
29508172951656840putative polar amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
29516432952308666putative polar amino acid ABC transporterpermease componentQuickGO ontologyBLASTP
29523532953201849putative polar amino acid ABC transportersubstrate-binding proteinQuickGO ontologyBLASTP
29534102953895486hypothetical protein