Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:1057259 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
105725910593102052protease 2QuickGO ontologyBLASTP
10593471060045699exodeoxyribonuclease XQuickGO ontologyBLASTP
10600691060725657hypothetical proteinBLASTP
10608331061063231DNA polymerase III subunit thetaQuickGO ontologyBLASTP
10612011061575375hypothetical proteinBLASTP
10615761062451876cation transporterQuickGO ontologyBLASTP
10624681062821354hypothetical proteinBLASTP
10628821062998117hypothetical proteinBLASTP
10644461065432987hypothetical proteinBLASTP
10654811065651171BLASTP
10663021067072771hypothetical proteinBLASTP
10677201068469750hypothetical proteinBLASTP
10694541069783330BLASTP
10702461070641396hypothetical proteinBLASTP
10706171070769153hypothetical proteinBLASTP
107092810720581131hypothetical proteinBLASTP
107245410744331980hydrolaseQuickGO ontologyBLASTP
10744511074642192hypothetical proteinBLASTP
10748421075456615hypothetical proteinBLASTP
10754661075588123hypothetical proteinBLASTP
10757571076671915hypothetical proteinBLASTP
10779601078328369hypothetical proteinBLASTP
10797931079933141hypothetical proteinBLASTP
10800991080368270hypothetical proteinBLASTP
10807391081158420acetyltransferaseQuickGO ontologyBLASTP
10815341082010477hypothetical proteinBLASTP
10823261082733408hypothetical proteinBLASTP
10834161084138723type III-secreted protein effector invasion-associated proteinQuickGO ontologyBLASTP