Pre_GI: OUP Neighbours

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Query: NC_011751:1377457 Escherichia coli UMN026 chromosome, complete genome

D: 36.813

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 60




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome76.1305 %Subject ←→ Query29.1646
NC_003143:4006884Yersinia pestis CO92, complete genome77.4203 %Subject ←→ Query29.6176
NC_014500:2616423Dickeya dadantii 3937 chromosome, complete genome76.7647 %Subject ←→ Query29.9702
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome76.4216 %Subject ←→ Query30.1556
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome75.8211 %Subject ←→ Query30.3016
NC_014500:2525880Dickeya dadantii 3937 chromosome, complete genome77.3468 %Subject ←→ Query30.3147
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence77.2978 %Subject ←→ Query31.1132
NC_009832:358291Serratia proteamaculans 568, complete genome75.7292 %Subject ←→ Query31.5844
NC_008563:3119284Escherichia coli APEC O1, complete genome80.913 %Subject ←→ Query31.9127
NC_007519:3240864*Desulfovibrio alaskensis G20 chromosome, complete genome75.3891 %Subject ←→ Query32.733
NC_014306:2476316Erwinia billingiae Eb661, complete genome75.8762 %Subject ←→ Query32.9311
NC_015968:2195645Enterobacter asburiae LF7a chromosome, complete genome75.6403 %Subject ←→ Query33.0849
NC_007384:1763375Shigella sonnei Ss046, complete genome78.6213 %Subject ←→ Query33.4012
NC_013592:2160000Dickeya dadantii Ech586, complete genome77.9167 %Subject ←→ Query33.4874
NC_012912:2285778Dickeya zeae Ech1591, complete genome78.5355 %Subject ←→ Query33.4887
NC_012912:2174183Dickeya zeae Ech1591, complete genome75.3094 %Subject ←→ Query33.679
NC_004547:3817656Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.4933 %Subject ←→ Query34.15
NC_014304:77715Erwinia billingiae Eb661 plasmid pEB102, complete sequence75.4167 %Subject ←→ Query34.3324
CU928160:256932Escherichia coli IAI1 chromosome, complete genome78.5417 %Subject ←→ Query34.5956
NC_014121:1038554Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.3542 %Subject ←→ Query34.8127
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome81.4185 %Subject ←→ Query34.8158
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome76.5472 %Subject ←→ Query34.9445
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.0184 %Subject ←→ Query35.4207
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence77.9902 %Subject ←→ Query35.5879
NC_009832:1946401Serratia proteamaculans 568, complete genome81.2623 %Subject ←→ Query35.908
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete78.3517 %Subject ←→ Query36.1113
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.0613 %Subject ←→ Query36.1376
NC_013961:3083816Erwinia amylovora, complete genome76.394 %Subject ←→ Query36.2172
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence78.5539 %Subject ←→ Query36.3239
NC_009801:3374501*Escherichia coli E24377A, complete genome77.9504 %Subject ←→ Query36.3653
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.4167 %Subject ←→ Query36.3874
NC_004431:1352906Escherichia coli CFT073, complete genome92.8002 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome87.8156 %Subject ←→ Query36.4725
NC_011080:2789744*Salmonella enterica subsp. enterica serovar Newport str. SL254,75.4381 %Subject ←→ Query36.512
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome87.8738 %Subject ←→ Query36.7127
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.3928 %Subject ←→ Query37.159
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome87.4755 %Subject ←→ Query37.275
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,77.3989 %Subject ←→ Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome79.6906 %Subject ←→ Query37.4593
NC_014500:2934232*Dickeya dadantii 3937 chromosome, complete genome75.1838 %Subject ←→ Query37.5286
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str77.2947 %Subject ←→ Query37.6094
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome89.3689 %Subject ←→ Query37.6581
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.9835 %Subject ←→ Query38.0253
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence81.9822 %Subject ←→ Query38.0958
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.8609 %Subject ←→ Query38.1505
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome78.6581 %Subject ←→ Query38.2235
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome75.8854 %Subject ←→ Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome87.598 %Subject ←→ Query38.4667
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome87.3468 %Subject ←→ Query38.6045
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome80.6587 %Subject ←→ Query39.0625
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome75.6495 %Subject ←→ Query39.7546
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str75.4596 %Subject ←→ Query39.786
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome77.9718 %Subject ←→ Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome76.9393 %Subject ←→ Query40.1776
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete82.7911 %Subject ←→ Query40.59
NC_013592:1424560Dickeya dadantii Ech586, complete genome76.6268 %Subject ←→ Query41.2418
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome76.924 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome76.7279 %Subject ←→ Query41.5453
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence80.1011 %Subject ←→ Query46.3542
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.5362 %Subject Query49.6231