Pre_GI: BLASTP Hits

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Query: NC_015709:1769806:1784282 Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete

Start: 1784282, End: 1784989, Length: 708

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Country: United Kingdom; Isolation: Sick cider; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009142:5459819:546278154627815463392612Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, TetR family4e-50197
NC_020064:1409596:143973814397381440349612Serratia marcescens FGI94, complete genometranscriptional regulator3e-49194
NC_016628:935420:940067940067940657591Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, TetR family9e-40163
NC_021177:2241647:224302222430222243660639Streptomyces fulvissimus DSM 40593, complete genomeTetR family transcriptional regulator5e-33140
NC_010002:4326509:432650943265094327135627Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family1e-32140
NC_015563:3203012:325163832516383252264627Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR6e-32137
NC_010551:2537876:255936425593642559978615Burkholderia ambifaria MC40-6 chromosome 1, complete sequencetranscriptional regulator, TetR family2e-30132
NC_007510:2805121:281997328199732820587615Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, TetR family2e-29129
NC_020418:3102460:310548531054853106096612Morganella morganii subsp. morganii KT, complete genomeTranscriptional regulator, TetR family3e-29128
NC_008542:2631138:265003426500342650657624Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, TetR family4e-29128
NC_008060:1945597:196449319644931965116624Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetranscriptional regulator, TetR family4e-29128
NC_015856:3059737:307258730725873073210624Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator2e-28126
NC_012968:1191037:120075812007581201360603Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family2e-28125
NC_002927:1292573:129502512950251295645621Bordetella bronchiseptica RB50, complete genomeputative TetR-family transcriptional regulator4e-28124
NC_021066:3028421:304263130426313043224594Raoultella ornithinolytica B6, complete genomeTetR family transcriptional regulator5e-27121
NC_002927:4392768:441134744113474411967621Bordetella bronchiseptica RB50, complete genomeputative TetR-family transcriptional regulator4e-26118
NC_014623:9492000:949227594922759492889615Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTetR family transcriptional regulator1e-25116
NC_016631:3245501:325459032545903255171582Granulicella mallensis MP5ACTX8 chromosome, complete genomeregulatory protein TetR5e-25114
NC_010410:3719599:374375137437513744401651Acinetobacter baumannii AYE, complete genomeputative regulator (TetR/AcrR family)6e-24110
NC_016582:11672500:116874191168741911688027609Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator3e-22105
NC_010084:988908:988908988908989543636Burkholderia multivorans ATCC 17616 chromosome 1, completeTetR family transcriptional regulator3e-22105
NC_010804:2518695:253523025352302535865636Burkholderia multivorans ATCC 17616 chromosome 1, completeTetR family transcriptional regulator3e-22105
NC_014659:4908182:491490549149054915444540Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator3e-2099
NC_013947:373862:390307390307390966660Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family6e-1787.8
NC_020063:2077233:208847920884792089114636Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator9e-1787
NC_016010:1247008:125118812511881251784597Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeTetR family transcriptional regulator1e-1686.7
NC_011147:1267005:127269412726941273284591Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator3e-1685.5
NC_006511:1273162:127885112788511279441591Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator3e-1685.5
NC_003902:1220600:122060012206001221190591Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-1684.7
NC_011080:1750000:176368517636851764275591Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, TetR family5e-1684.7
NC_011094:1726000:174050417405041741094591Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, TetR family protein4e-1684.7
NC_006905:1766000:178046117804611781051591Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory helix-turn-helix proteins, araC family8e-1684
NC_003197:1753663:176733217673321767922591Salmonella typhimurium LT2, complete genomeputative regulatory protein1e-1583.6
NC_016810:1709695:172418617241861724776591Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-1583.6
NC_016856:1763640:177731017773101777900591Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein1e-1583.6
NC_016857:1709695:172418617241861724776591Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative regulatory protein1e-1583.6
NC_016860:1752000:176502317650231765613591Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-1583.6
NC_016863:1711832:172550217255021726092591Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein1e-1583.6
NC_017046:1709578:172406917240691724659591Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator1e-1583.6
NC_004631:1623511:163800716380071638597591Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator1e-1583.6
NC_003198:1336894:134258513425851343175591Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator1e-1583.6
NC_011149:1429523:143521314352131435803591Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, TetR family1e-1583.6
NC_015379:4249238:427499442749944275626633Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, TetR family4e-1581.6
NC_009648:1487692:151769215176921518285594Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative regulatory protein TetR5e-1581.3
NC_009142:5519208:552635655263565526955600Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator7e-1580.9
NC_008705:868623:931779931779932327549Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family1e-1480.5
NC_008146:861319:923050923050923598549Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family1e-1480.5
NC_012731:2302974:232991623299162330545630Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeTetR family transcriptional regulator9e-1580.5
NC_010498:4821519:482934548293454829938594Escherichia coli SMS-3-5, complete genomeTetR family transcriptional regulator8e-1477.4
NC_000913:4462782:447214744721474472740594Escherichia coli K12, complete genomepredicted transcriptional regulator9e-1477
AC_000091:4472000:447880444788044479397594Escherichia coli W3110 DNA, complete genomepredicted transcriptional regulator9e-1477
NC_010473:4564590:457395545739554574548594Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transcriptional regulator9e-1477
NC_015559:1478114:149093514909351491531597Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeTetR family transcriptional regulator2e-1376.3
NC_011742:4795733:480355848035584804151594Escherichia coli S88 chromosome, complete genometranscriptional regulator2e-1375.9
NC_012967:4449576:445740144574014457994594Escherichia coli B str. REL606 chromosome, complete genomeputative transcriptional regulator4e-1375.1
NC_012947:3947238:395611439561143956707594Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeTetR family transcriptional regulator4e-1375.1
NC_010658:4494103:450496945049694505562594Shigella boydii CDC 3083-94, complete genometranscriptional regulator, TetR family4e-1375.1
UCMB5137:1:265826583233576Bacillus atrophaeus UCMB-5137hypothetical protein6e-1374.3
NC_009720:3281000:329115032911503291818669Xanthobacter autotrophicus Py2, complete genomeTetR family transcriptional regulator9e-1373.9
NC_013406:3521489:354052835405283541106579Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator9e-1373.9
NC_007948:517893:533902533902534492591Polaromonas sp. JS666, complete genometranscriptional regulator, TetR family1e-1273.2
NC_014664:1669642:168504116850411685649609Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeregulatory protein TetR3e-1272
NC_012914:1923500:193114719311471931740594Paenibacillus sp. JDR-2, complete genometranscriptional regulator, TetR family4e-1272
NC_016514:2079975:209723320972332097853621Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcfQ2e-1169.7
NC_009725:496443:514054514054514629576Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-1169.7
NC_019897:73957:109118109118109699582Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator1e-1169.7
NC_014258:355845:365469365469366095627Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional repressor AcnR5e-1167.8
NC_015690:1348691:137475713747571375335579Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator8e-1167.4
NC_020063:3690308:371432137143213714902582Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator8e-1167.4
NC_016935:1868839:189862518986251899203579Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator8e-1167.4
NC_016047:637778:653172653172653747576Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetranscriptional regulator TetR1e-1066.6
NC_014841:41773:551085510855716609Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, TetR family3e-1065.5
NC_014306:4901390:491379349137934914401609Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family3e-1065.5
NC_013956:3273340:329451032945103295127618Pantoea ananatis LMG 20103 chromosome, complete genomeYcfQ4e-1065.1
NC_016816:1137904:114302111430211143638618Pantoea ananatis LMG 5342, complete genometranscriptional regulator4e-1065.1
NC_015759:760671:764668764668765258591Weissella koreensis KACC 15510 chromosome, complete genomeTerR family transcriptional regulator5e-1064.7
NC_013037:2851940:288141928814192882000582Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, TetR family1e-0963.5
NC_014838:589581:608819608819609418600Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, TetR family1e-0963.5
NC_013169:805124:815286815286815897612Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator2e-0963.2
NC_016935:2503071:254529025452902545868579Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator6e-0961.2
NC_015690:1967244:201240220124022012980579Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator6e-0961.2
NC_007492:3384077:339444033944403395021582Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family8e-0960.8
NC_013235:5127148:513109951310995131689591Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, TetR family1e-0860.5
NC_010815:40357:575715757158143573Geobacter lovleyi SZ plasmid pGLOV01, complete sequencetranscriptional regulator, TetR family2e-0859.7
NC_014659:2737843:273784327378432738469627Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator2e-0859.3
NC_009142:6086000:608623460862346086818585Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulatory protein3e-0858.9
NC_015856:3832000:383402238340223834645624Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator3e-0858.9
NC_016641:2291363:231364123136412314216576Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator4e-0858.5
NC_014318:2252417:225415722541572254747591Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator4e-0858.5
NC_017186:2252438:225417822541782254768591Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator4e-0858.5
NC_010170:1470755:148942714894271490008582Bordetella petrii, complete genometranscriptional regulator, TetR-family1e-0757
NC_016582:11380000:113875491138754911388190642Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator1e-0756.6
NC_014153:2125551:213126221312622131957696Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, TetR family6e-0754.7
NC_018681:2985078:299752129975212998117597Nocardia brasiliensis ATCC 700358 chromosome, complete genometetr family transcriptional regulator7e-0754.3
NC_014659:2737843:274255227425522743154603Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator2e-0652.8