Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:1267005 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
126700512686181614periplasmic murein peptide-binding protein MppAQuickGO ontologyBLASTP
12697621270667906transcriptional regulatorQuickGO ontologyBLASTP
12709431271812870oxidoreductaseQuickGO ontologyBLASTP
12719031272616714oxidoreductaseQuickGO ontologyBLASTP
12726941273284591transcriptional regulatorQuickGO ontologyBLASTP
12734131273649237lipoproteinQuickGO ontologyBLASTP
12753591276210852transcriptional regulatorQuickGO ontologyBLASTP
12765081277353846lipoproteinQuickGO ontologyBLASTP
12794381280265828hypothetical proteinBLASTP
12803641280921558thiol peroxidaseQuickGO ontologyBLASTP
12810281281366339hypothetical proteinBLASTP
12813941282080687hypothetical proteinBLASTP
12821241282726603hypothetical proteinBLASTP
128281212838431032hypothetical proteinBLASTP
12840821284336255hypothetical proteinBLASTP
12843911285338948universal stress protein UspEQuickGO ontologyBLASTP
12854891286283795fumaratenitrate reduction transcriptional regulatorQuickGO ontologyBLASTP
12864371286952516O-6-alkylguanine-DNAcysteine-protein methyltransferaseQuickGO ontologyBLASTP
12872171287780564hypothetical proteinBLASTP
12894911290474984zinc transporterQuickGO ontologyBLASTP