Pre_GI: BLASTP Hits

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Query: NC_015275:3407358:3444146 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 3444146, End: 3446431, Length: 2286

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011898:3973627:3977028397702839793102283Clostridium cellulolyticum H10, complete genomesuperfamily I DNA helicase7e-125448
NC_008593:841291:8579148579148601992286Clostridium novyi NT, complete genomesuperfamily I DNA helicase8e-124445
NC_012491:1187864:1187864118786411902242361Brevibacillus brevis NBRC 100599, complete genomeprobable DNA helicase involved in recombination1e-78295
NC_011772:1011220:1023748102374810260842337Bacillus cereus G9842, complete genomehelicase, UvrD/Rep family7e-78292
NC_008262:654000:6735736735736756932121Clostridium perfringens SM101, complete genomehelicase, putative7e-77288
NC_017208:1050414:1066257106625710685932337Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent DNA helicase rep1e-76288
NC_020291:4357425:4359233435923343614732241Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehelicase IV3e-76286
NC_003366:728859:7480767480767501962121Clostridium perfringens str. 13, complete genomehypothetical protein3e-76286
NC_008261:676000:6953866953866975062121Clostridium perfringens ATCC 13124, complete genomeputative helicase4e-76286
NC_014171:1018338:1036689103668910390222334Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent DNA helicase rep6e-74279
NC_011773:1050000:1069750106975010720802331Bacillus cereus AH820 chromosome, complete genomeUvrD/Rep family helicase8e-74278
NC_004722:1008500:1021931102193110242642334Bacillus cereus ATCC 14579, complete genomeATP-dependent DNA helicase rep1e-73278
NC_011725:1032500:1048278104827810506112334Bacillus cereus B4264 chromosome, complete genomeUvrD/Rep family helicase3e-73277
NC_016779:991298:1009000100900010113302331Bacillus cereus F837/76 chromosome, complete genomeUvrD/Rep family helicase4e-73276
NC_010184:1017000:1031326103132610336622337Bacillus weihenstephanensis KBAB4, complete genomeUvrD/REP helicase1e-72275
NC_017200:1157835:1176271117627111786042334Bacillus thuringiensis serovar finitimus YBT-020 chromosome,helicase, UvrD/Rep family protein3e-72273
NC_011969:1084000:1101280110128011036162337Bacillus cereus Q1 chromosome, complete genomeATP-dependent DNA helicase replicase6e-72272
NC_004557:2607073:2609418260941826115502133Clostridium tetani E88, complete genomeATP-dependent DNA helicase rep9e-72272
NC_013406:4023367:4037035403703540394612427Paenibacillus sp. Y412MC10 chromosome, complete genomeUvrD/Rep family helicase1e-66255
NC_013199:1966334:1984402198440219866932292Lactobacillus rhamnosus Lc 705, complete genomesuperfamily I DNA and RNA helicase-like protein5e-64246
NC_014334:1848340:1869908186990818721992292Lactobacillus casei str. Zhang chromosome, complete genomesuperfamily I DNA and RNA helicase4e-63243
NC_015978:352478:3729943729943752942301Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein2e-62241
NC_004567:343500:3840383840383863472310Lactobacillus plantarum WCFS1, complete genomeDNA helicase (putative)2e-59231
NC_015975:441580:4644374644374667162280Lactobacillus ruminis ATCC 27782 chromosome, complete genomeATP-dependent DNA helicase1e-55218
NC_016012:104500:1170321170321191252094Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeATP-dependent DNA helicase1e-48195
NC_003909:1139556:1140312114031211418891578Bacillus cereus ATCC 10987, complete genome3e-47190
NC_013947:1296877:1296877129687712988141938Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeSuperfamily I DNA and RNA helicase-like protein5e-39163
NC_015977:3424178:3522058352205835252703213Roseburia hominis A2-183 chromosome, complete genomeUvrD/Rep helicase family protein1e-32142
NC_009342:1570000:1585112158511215874632352Corynebacterium glutamicum R chromosome, complete genomehypothetical protein5e-30133
NC_014210:3170537:3190003319000331931493147Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Superfamily I DNA and RNA helicase2e-29131
NC_004369:1552847:1568036156803615703812346Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-28127
NC_013757:1888850:1891505189150518936552151Geodermatophilus obscurus DSM 43160, complete genomesuperfamily I DNA and RNA helicase6e-24113
NC_018524:4988810:5009665500966550118152151Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeuvrD/REP helicase N-terminal domain protein1e-23112
NC_003909:1139556:113955611395561140365810Bacillus cereus ATCC 10987, complete genomehypothetical protein5e-23110
NC_006361:4574536:4576673457667345788532181Nocardia farcinica IFM 10152, complete genomeputative helicase4e-22107
NC_013729:380312:3803123803123824802169Kribbella flavida DSM 17836, complete genomeSuperfamily I DNA and RNA helicase-like protein7e-22106
NC_012803:1552122:1568191156819115704672277Micrococcus luteus NCTC 2665, complete genomeDNA/RNA helicase, superfamily I8e-22106
NC_016582:7946000:7960285796028579624622178Streptomyces bingchenggensis BCW-1 chromosome, complete genomesuperfamily I DNA and RNA helicase-like protein5e-20100
NC_016582:10287865:1030133210301332103034102079Streptomyces bingchenggensis BCW-1 chromosome, complete genomesuperfamily I DNA and RNA helicase-like protein1e-1999
NC_009973:301391:3101723101723123402169Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completesuperfamily I DNA/RNA helicase4e-1997.4
NC_016113:11500:1173611736137632028Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceATP-dependent DNA helicase8e-1996.3
NC_013510:2937530:2960722296072229633072586Thermomonospora curvata DSM 43183, complete genomeSuperfamily I DNA and RNA helicase-like protein3e-1584.3
NC_007498:3399478:3401690340169034036661977Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein1e-1482
NC_015588:1213873:1233287123328712355662280Isoptericola variabilis 225 chromosome, complete genomehypothetical protein3e-1377.4
NC_012918:1814000:1826660182666018285491890Geobacter sp. M21 chromosome, complete genomesuperfamily I DNA and RNA helicase-like protein4e-1273.9
NC_019902:3397170:3401800340180034035691770Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II; NERD domain-containing protein1e-1068.9
NC_019903:1745849:1745849174584917472641416Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,DNA/RNA helicase1e-1068.9
NC_017093:7234589:7240800724080072424881689Actinoplanes missouriensis 431, complete genomehypothetical protein6e-1066.6
NC_017093:6461486:6459294645929464614892196Actinoplanes missouriensis 431, complete genomeputative DNA helicase6e-1066.6
NC_004722:4405363:4435208443520844366261419Bacillus cereus ATCC 14579, complete genomeSuperfamily I DNA and RNA helicases5e-0963.5
NC_008726:6393489:6431952643195264341652214Mycobacterium vanbaalenii PYR-1, complete genomeUvrD/REP helicase1e-0862
NC_008260:1885969:1904538190453819064331896Alcanivorax borkumensis SK2, complete genomeHypotetical protein2e-0861.6
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor3e-0861.2
NC_012856:1080000:1096679109667910984421764Ralstonia pickettii 12D chromosome 1, complete genomeUvrD/REP helicase3e-0861.2
NC_014310:94645:99969999691018071839Ralstonia solanacearum PSI07 megaplasmid, complete sequencehelicase protein3e-0860.8
NC_006177:1422932:1438983143898314410642082Symbiobacterium thermophilum IAM 14863, complete genomeputative DNA helicase4e-0860.5
NC_006958:748500:7623767623767646762301Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE DNA HELICASE9e-0859.7
NC_003450:747000:7609037609037632032301Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase9e-0859.7
NC_003296:140889:1483601483601501981839Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein8e-0859.7
NC_013757:3897413:3909839390983939120972259Geodermatophilus obscurus DSM 43160, complete genomeUvrD/REP helicase8e-0859.7
NC_015690:7785875:7806015780601578079401926Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNERD domain-containing protein1e-0759.3
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein1e-0759.3
NC_016935:7872425:7878284787828478802091926Paenibacillus mucilaginosus 3016 chromosome, complete genomeNERD domain-containing protein1e-0758.9
NC_011901:1860887:1879189187918918810481860Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDNA helicase II2e-0758.2
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor3e-0757.8
NC_014924:3334386:3341593334159333434701878Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein4e-0757.4
NC_008228:816000:8307258307258335142790Pseudoalteromonas atlantica T6c, complete genomeUvrD/REP helicase4e-0757.4
NC_011661:1411383:1411383141138314132601878Dictyoglomus turgidum DSM 6724, complete genomeUvrD/REP helicase6e-0757
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase8e-0756.6
NC_011297:1224749:1231122123112212329991878Dictyoglomus thermophilum H-6-12, complete genomeATP-dependent DNA helicase PcrA1e-0655.5
NC_008596:1302000:1343125134312513453382214Mycobacterium smegmatis str. MC2 155, complete genomeUvrD/Rep helicase2e-0655.5
NC_018679:1738126:1756438175643817585702133Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative DNA helicase2e-0655.5
NC_018419:226000:2279972279972301502154Secondary endosymbiont of Ctenarytaina eucalypti chromosome,ATP-dependent DNA helicase UvrD2e-0655.1
NC_002505:168532:1942141942141963852172Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA helicase II2e-0655.1
NC_012668:442601:4426014426014447722172Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA-dependent helicase II2e-0655.1
NC_016445:2593800:2619482261948226216532172Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-dependent helicase II2e-0655.1
NC_016944:168530:1942241942241963952172Vibrio cholerae IEC224 chromosome I, complete sequenceDNA-dependent helicase II2e-0655.1
NC_013441:382597:3963933963933985372145Gordonia bronchialis DSM 43247, complete genomeUvrD/REP helicase6e-0653.5
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase7e-0653.1