Pre_GI Gene

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Host: NC_016944 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016944:168530 Vibrio cholerae IEC224 chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1685301702451716cell division transporter ATP-binding protein FtsEQuickGO ontologyBLASTP
1703371718931557peptide ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
172048173025978peptidenickel transport system permease proteinQuickGO ontologyBLASTP
173028173966939peptidenickel transport system permease proteinQuickGO ontologyBLASTP
174141175088948hypothetical proteinBLASTP
1753411769301590deoxycytidylate deaminase-likeproteinQuickGO ontologyBLASTP
177006177239234hypothetical protein
177448177756309hypothetical proteinBLASTP
177871178422552hypothetical proteinBLASTP
178909179157249hypothetical protein
1793361804031068patatin-likeproteinQuickGO ontologyBLASTP
1804231817271305hypothetical proteinBLASTP
1817301834841755hypothetical proteinBLASTP
183477183944468hypothetical proteinBLASTP
183955184386432hypothetical proteinBLASTP
1843581864692112phage integraseQuickGO ontologyBLASTP
1864791881671689hypothetical proteinBLASTP
1881641893781215hypothetical proteinBLASTP
1894671908191353glutathione reductaseQuickGO ontologyBLASTP
190925191764840DNA processing proteinQuickGO ontologyBLASTP
1920441940862043oligopeptidase AQuickGO ontologyBLASTP
1942241963952172DNA-dependent helicase IIQuickGO ontologyBLASTP
197140197808669hypothetical proteinBLASTP
197883198695813AraCXylS family transcriptional regulatorQuickGO ontologyBLASTP
1988432005971755gamma-glutamyltranspeptidaseQuickGO ontologyBLASTP