Pre_GI: BLASTP Hits

Some Help

Query: NC_014834:959986:977652 Rhodopseudomonas palustris DX-1 chromosome, complete genome

Start: 977652, End: 980117, Length: 2466

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Fresh water, Soil; Temp: Mesophile. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009720:3317642:3338681333868133411192439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE01422
NC_010725:3315007:3312572331257233150102439Methylobacterium populi BJ001, complete genomeAAA ATPase01395
NC_009937:4392108:4411982441198244144202439Azorhizobium caulinodans ORS 571, complete genomeATPase precursor01375
NC_009720:4406991:4425146442514644275842439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE01374
NC_009720:670853:6708536708536732822430Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE01365
NC_009720:813157:8327138327138351512439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE01362
NC_010338:4148667:4148667414866741511232457Caulobacter sp. K31, complete genomeAAA ATPase01352
NC_009668:529175:5351505351505376602511Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer ATPase TrbE01304
NC_014834:614890:6148906148906173312442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB01282
NC_008686:1439328:1441768144176814442782511Paracoccus denitrificans PD1222 chromosome 1, complete sequenceAAA ATPase01280
NC_007925:3911323:3930710393071039331512442Rhodopseudomonas palustris BisB18, complete genomeATPase01254
NC_014834:3472000:3503841350384135062822442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB01248
NC_010125:1011430:1030697103069710331232427Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbE01173
NC_011365:1135750:1136493113649311389192427Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer ATPase TrbE01166
NC_010125:2813653:2834802283480228372342433Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbE01163
NC_015381:2859000:2877033287703328794832451Burkholderia gladioli BSR3 chromosome 1, complete sequenceATPase0965
NC_018691:3082000:3099974309997431024242451Alcanivorax dieselolei B5 chromosome, complete genomeATPase0965
NC_008577:1489643:1495263149526314977132451Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase0958
NC_003295:2787371:2787371278737127898212451Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER PROTEIN TRBE0954
NC_015410:3209954:3207528320752832099572430Pseudomonas mendocina NK-01 chromosome, complete genomeconjugal transfer ATPase TrbE0953
NC_014910:2930860:2930860293086029333192460Alicycliphilus denitrificans BC chromosome, complete genomecage, trbe, virb component of type iv transporter system, conserved region protein0951
NC_015556:2265940:2265940226594022683692430Pseudomonas fulva 12-X chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region0949
NC_011992:3752867:3752867375286737553382472Acidovorax ebreus TPSY, complete genomeCagE TrbE VirB component of type IV transporter system0947
NC_010002:2933909:2964490296449029669612472Delftia acidovorans SPH-1, complete genomeAAA ATPase0944
NC_009719:1972545:1988312198831219907382427Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer ATPase TrbE0936
NC_015422:1643000:1663023166302316654762454Alicycliphilus denitrificans K601 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region0934
NC_010170:4800000:4880844488084448833062463Bordetella petrii, complete genomeconjugal transfer protein TrbE0925
NC_009656:3817261:3838044383804438404972454Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer ATPase TrbE0924
NC_014500:894136:8941368941368966042469Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbE0921
NC_015186:2839668:2860699286069928634192721Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbE0898
NC_013422:1755875:1755875175587517583342460Halothiobacillus neapolitanus c2, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region1e-160567
NC_008781:2611702:2636646263664626390902445Polaromonas naphthalenivorans CJ2, complete genomeCagE, TrbE, VirB component of type IV transporter system2e-154546
NC_015942:1889421:1889881188988118924332553Acidithiobacillus ferrivorans SS3 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system1e-152540
NC_015437:697051:7258257258257282902466Selenomonas sputigena ATCC 35185 chromosome, complete genomeAAA ATPase4e-149529
NC_011206:1293880:1291361129136112938832523Acidithiobacillus ferrooxidans ATCC 53993, complete genomeCagE TrbE VirB component of type IV transporter system1e-148527
NC_015221:12389:1238912389149232535Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family6e-138492
NC_006371:1743982:1748726174872617511222397Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbE protein2e-137490
NC_013861:3341955:3359877335987733624142538Legionella longbeachae NSW150, complete genomeConjugal transfer protein trbE precursor1e-130467
NC_013192:1033177:1054164105416410566472484Leptotrichia buccalis DSM 1135, complete genomeCagE TrbE VirB component of type IV transporter system6e-121435
NC_015386:125499:1367791367791393552577Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeCagE, TrbE, VirB component of type IV transporter system, conserved region3e-110400
NC_015385:1875671:1875671187567118782442574Treponema succinifaciens DSM 2489 chromosome, complete genomeAAA ATPase4e-108393
NC_007643:955362:960586960586961362777Rhodospirillum rubrum ATCC 11170, complete genomeconjugal transfer protein1e-98361
NC_015850:2048251:2076658207665820790212364Acidithiobacillus caldus SM-1 chromosome, complete genometype IV secretory pathway VirB4 components-like protein2e-58228
NC_017028:180219:1951301951301975472418Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetype IV secretion system ATPase VirB41e-48195
NC_007950:206474:2165752165752191272553Polaromonas sp. JS666 plasmid 2, complete sequenceType IV secretory pathway VirB4 components-like5e-48193
NC_017044:130000:1353941353941378112418Rickettsia parkeri str. Portsmouth chromosome, complete genometype IV secretion system ATPase VirB41e-47192
NC_016929:109500:1131401131401155572418Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system ATPase VirB42e-47191
NC_009879:107890:1122791122791146962418Rickettsia canadensis str. McKiel, complete genomeType IV secretion/conjugal transfer ATPase, VirB4 family protein2e-47191
NC_011985:3869998:3871859387185938742462388Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB43e-47190
NC_000963:110500:1140231140231164402418Rickettsia prowazekii str. Madrid E, complete genomeVIRB4 PROTEIN PRECURSOR (virB4)1e-46189
NC_017050:110500:1140211140211164382418Rickettsia prowazekii str. Katsinyian chromosome, complete genometype IV secretion system ATPase VirB41e-46189
NC_007798:758873:7709267709267733372412Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB42e-46188
NC_017048:452000:4560924560924585092418Rickettsia prowazekii str. GvV257 chromosome, complete genometype IV secretion system ATPase VirB42e-46188
NC_017049:109000:1122221122221146392418Rickettsia prowazekii str. Chernikova chromosome, complete genometype IV secretion system ATPase VirB42e-46188
NC_017051:109000:1122251122251146422418Rickettsia prowazekii str. Dachau chromosome, complete genometype IV secretion system ATPase VirB42e-46188
NC_017056:110500:1140311140311164482418Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometype IV secretion system ATPase VirB42e-46188
NC_017057:110000:1141481141481165652418Rickettsia prowazekii str. RpGvF24 chromosome, complete genometype IV secretion system ATPase VirB42e-46188
NC_006142:33268:4454644546469632418Rickettsia typhi str. Wilmington, complete genomeVirB4 protein precursor1e-46188
NC_017062:33268:4451344513469302418Rickettsia typhi str. B9991CWPP chromosome, complete genometype IV secretion system ATPase VirB41e-46188
NC_017066:33268:4454644546469632418Rickettsia typhi str. TH1527 chromosome, complete genometype IV secretion system ATPase VirB41e-46188
NC_016616:2699350:2726787272678727293782592Dechlorosoma suillum PS chromosome, complete genometype IV secretory pathway, VirB4 component4e-45183
NC_015593:1587684:1602558160255816049302373Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completetype IV secretion/conjugal transfer ATPase VirB4 family3e-44181
NC_009488:1871912:1877046187704618794632418Orientia tsutsugamushi str. Boryong, complete genometype IV secretion system ATPase VirB42e-43177
NC_010793:794494:7995707995708019872418Orientia tsutsugamushi str. Ikeda, complete genometype IV secretion system protein VirB46e-43176
NC_007354:756500:7787647787647811662403Ehrlichia canis str. Jake, complete genomeCagE, TrbE, VirB family component of typeIV transporter system6e-43176
NC_007799:474931:4813444813444837462403Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein VirB41e-41172
NC_006831:849500:8734978734978759022406Ehrlichia ruminantium str. Gardel, complete genomeVIRB4 protein precursor1e-41172
NC_006832:853500:8778888778888802932406Ehrlichia ruminantium str. Welgevonden, complete genomeVIRB4 protein precursor1e-41172
NC_005295:873500:8983268983269007282403Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirB48e-42172
NC_010682:1593108:1614519161451916169662448Ralstonia pickettii 12J chromosome 1, complete sequencetype IV secretory pathway VirB4 components-like protein1e-41171
NC_008757:77023:97607976071000722466Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeType IV secretory pathway VirB4 components-like protein3e-40167
NC_017271:2935643:2964110296411029665512442Xanthomonas campestris pv. raphani 756C chromosome, completeVirB4 protein2e-30134
NC_012912:1295653:131348813134881313904417Dickeya zeae Ech1591, complete genome2e-29131
NC_015947:2752450:2763456276345627659032448Burkholderia sp. JV3 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family2e-28128
NC_011071:2733438:2745103274510327475502448Stenotrophomonas maltophilia R551-3, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family2e-28128
NC_010524:933191:9346559346559371472493Leptothrix cholodnii SP-6, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family1e-28128
NC_013722:2150882:2156995215699521594662472Xanthomonas albilineans, complete genomeprobable type iv secretion system protein virb46e-28126
NC_008786:4102606:4103355410335541058262472Verminephrobacter eiseniae EF01-2, complete genomeType IV secretory pathway VirB4 components-like protein1e-27125
NC_010943:3034366:3043399304339930458462448Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion conjugal transfer protein2e-27124
NC_014801:1:2335823358261262769Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,type IV secretion system protein VirB45e-27123
NC_010688:1908012:1937139193713919395922454Xanthomonas campestris pv. campestris, complete genometype IV secretion system energizing component VirB46e-27123
NC_007086:1936505:1964408196440819668612454Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB4 protein2e-26122
NC_003902:2933121:2943358294335829458112454Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB4 protein2e-26122
NC_016513:2103958:2125571212557121283422772Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeATPase3e-26121
NC_003919:3060484:3079127307912730815802454Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB4 protein3e-25117
NC_010170:3908500:3916385391638539188292445Bordetella petrii, complete genometype IV secretion system protein VirB44e-25117
NC_011092:76993:8981789817925672751Salmonella enterica subsp. enterica serovar Schwarzengrund strTriC protein4e-25117
NC_009254:365812:3658123658123682802469Burkholderia vietnamiensis G4 chromosome 3, complete sequencetype IV secretion/conjugal transfer ATPase2e-24115
NC_010688:1908012:1944292194429219458151524Xanthomonas campestris pv. campestris, complete genomeVirB4 protein3e-23110
NC_013592:2968500:2998530299853030012742745Dickeya dadantii Ech586, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region7e-23109
NC_020181:473170:4949524949524976902739Enterobacter aerogenes EA1509E, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)3e-22107
NC_009792:859228:8810098810098837472739Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-22107
NC_012731:3411161:3450241345024134529792739Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB3-4 component2e-21105
NC_013416:939668:9496729496729512131542Aggregatibacter actinomycetemcomitans D11S-1, complete genomeATPase2e-21105
NC_016845:3448881:3469356346935634720942739Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB4 component5e-21103
NC_010676:2793237:2793237279323727957022466Burkholderia phytofirmans PsJN chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family4e-20100
NC_004547:1873390:1874142187414218768892748Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein2e-1998.2
NC_010515:1124298:1135251113525111377312481Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family3e-1997.4
NC_011001:372185:3810183810183834982481Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB45e-1997.1
NC_019973:5694620:5708002570800257103712370Mesorhizobium australicum WSM2073, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family7e-1996.7
NC_014923:5765660:5779042577904257814112370Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completetype IV secretion/conjugal transfer ATPase, VirB4 family7e-1996.7
NC_015675:6276357:6333713633371363360822370Mesorhizobium opportunistum WSM2075 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family7e-1996.7
NC_011283:1811000:1847938184793818506852748Klebsiella pneumoniae 342 chromosome, complete genometype IV secretion/conjugal transfer ATPase1e-1896.3
NC_012483:3731542:3781113378111337834792367Acidobacterium capsulatum ATCC 51196, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family1e-1895.9
NC_008543:127675:1494901494901519702481Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family2e-1894.7
NC_008061:2106848:2117799211779921202792481Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family2e-1894.7
NC_016818:1795576:1829965182996518327122748Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype IV secretory pathway, VirB4 component1e-1792.4
NC_012912:1701231:1705041170504117077882748Dickeya zeae Ech1591, complete genomeCagE TrbE VirB component of type IV transporter system4e-1790.5
NC_004842:950058:9562099562099586382430Anaplasma marginale str. St. Maries, complete genomeVirB4 protein6e-1790.1
NC_012026:960000:9603409603409627692430Anaplasma marginale str. Florida, complete genomeVirB4 protein6e-1790.1
NC_014500:3097362:3147941314794131507212781Dickeya dadantii 3937 chromosome, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)6e-1790.1
NC_017047:2079368:2079368207936820821152748Rahnella aquatilis HX2 chromosome, complete genomeputative conjugal transfer protein7e-1686.7
NC_014256:448710:4557574557574579102154Helicobacter pylori B8 chromosome, complete genomeprotein virB41e-1585.5
NC_018939:454000:4593394593394617622424Helicobacter pylori 26695 chromosome, complete genomeVirB4-like protein1e-1482.4
NC_000915:453958:4593334593334617562424Helicobacter pylori 26695, complete genomeVirB4 homolog1e-1482.4
NC_014555:1526775:1540379154037915427482370Helicobacter pylori PeCan4 chromosome, complete genomeVirB4-like protein2e-1481.6
NC_016626:1699500:1740570174057017432332664Burkholderia sp. YI23 plasmid byi_1p, complete sequenceType IV secretion system protein VirB41e-1379
NC_006833:976010:9866539866539890072355Wolbachia endosymbiont strain TRS of Brugia malayi, completeType IV secretory pathway, VirB4 components5e-1377
NC_014914:127873:1317401317401341452406Taylorella equigenitalis MCE9 chromosome, complete genomeVirB4 ATPase like protein1e-1172.8
NC_019904:5207309:5218691521869152211592469Echinicola vietnamensis DSM 17526 chromosome, complete genomeconjugation system ATPase, TraG family1e-1068.9
NC_015312:1265797:1287412128741212893221911Pseudonocardia dioxanivorans CB1190 chromosome, complete genometype IV secretory pathway VirB4 components-like protein8e-1066.6
NC_014041:3715000:3726977372697737294452469Zunongwangia profunda SM-A87 chromosome, complete genomeType IV secretory pathway VirB4 components-like protein2e-0965.1
NC_015571:1030527:1059222105922210617082487Porphyromonas gingivalis TDC60, complete genomeconjugative transposon protein TraG3e-0964.7
NC_004663:6223442:6252460625246062547782319Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved protein found in conjugate transposon3e-0964.7
NC_016776:246648:2554372554372579232487Bacteroides fragilis 638R, complete genomeputative conjugative transposon protein traG7e-0963.5
NC_009441:5248791:5259914525991452623732460Flavobacterium johnsoniae UW101 chromosome, complete genomeType IV secretory pathway VirB4 components-like protein7e-0963.5
NC_015177:1822000:1832448183244818349522505Pedobacter saltans DSM 12145 chromosome, complete genometype IV secretory pathway VirB4 components-like protein8e-0963.2
NC_015377:34445:3444534445370422598Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein9e-0963.2
NC_009614:2034265:2052760205276020552942535Bacteroides vulgatus ATCC 8482 chromosome, complete genomeconjugate transposon protein2e-0862.4
NC_009140:60806:8152081520839672448Salmonella enterica enterica sv Newport str. SL254, completetype IV conjugative transfer system protein TraC1e-0759.3
NC_010793:1811401:1851185185118518536742490Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC1e-0758.9
NC_010554:2646806:2689243268924326916422400Proteus mirabilis HI4320, complete genomeplasmid pilus assembly protein3e-0757.8
NC_010793:126111:1341671341671362152049Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC5e-0757.4