Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2083540 Clostridium difficile R20291, complete genome

Start: 2083540, End: 2084223, Length: 684

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012781:700226:722543722543723187645Eubacterium rectale ATCC 33656, complete genomeDNA primase5e-103373
NC_012781:2552723:257557225755722576216645Eubacterium rectale ATCC 33656, complete genomeDNA primase5e-103373
NC_013316:2033906:206428020642802064840561Clostridium difficile R20291, complete genomehypothetical protein7e-48190
NC_014830:3438504:3458664345866434601631500Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA primase catalytic core domain1e-1170.1
NC_013525:1953920:1972749197274919746201872Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeDNA primase3e-1065.5
NC_011661:1332309:1333581133358113353141734Dictyoglomus turgidum DSM 6724, complete genomeDNA primase3e-1065.5
NC_014733:2363838:2379761237976123815151755Methylovorus sp. MP688 chromosome, complete genomeDNA primase4e-1065.1
NC_012969:2476318:2510866251086625126201755Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeDNA primase6e-1064.3
NC_012668:62500:6615266152679571806Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA primase6e-1064.3
NC_016445:2938887:2963419296341929652481830Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA primase6e-1064.3
NC_013416:1429881:1450044145004414518011758Aggregatibacter actinomycetemcomitans D11S-1, complete genomeDNA primase9e-1063.9
NC_015856:1182974:1201614120161412034101797Collimonas fungivorans Ter331 chromosome, complete genomeDNA primase1e-0963.5
NC_019970:1991944:2000976200097620027721797Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA primase, catalytic core1e-0963.5
NC_007947:2447635:2481210248121024829401731Methylobacillus flagellatus KT, complete genomeDNA primase1e-0963.5
NC_012721:1986436:2007255200725520091411887Burkholderia glumae BGR1 chromosome 2, complete genomeDNA primase2e-0962.8
NC_009831:1255995:1275068127506812767891722Shewanella sediminis HAW-EB3, complete genomeDNA primase3e-0962
NC_014323:961825:9628329628329646281797Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA primase3e-0962
NC_009659:543000:5439475439475457461800Janthinobacterium sp. Marseille chromosome, complete genomeDNA primase4e-0961.6
NC_015555:863173:8703728703728721681797Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA primase4e-0961.6
NC_015224:3892972:3892972389297238947201749Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DNA primase7e-0960.8
NC_008800:4013298:4017292401729240190401749Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA primase7e-0960.8
NC_009708:633054:6515706515706533181749Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeDNA primase8e-0960.5
NC_010552:752007:7542487542487561161869Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDNA primase8e-0960.5
NC_009255:1071868:1074112107411210759831872Burkholderia vietnamiensis G4 chromosome 2, complete sequenceDNA primase8e-0960.5
NC_010805:530876:5330715330715349391869Burkholderia multivorans ATCC 17616 chromosome 2, completeDNA primase1e-0860.5
NC_016602:3122700:3125715312571531274601746Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceDNA primase1e-0860.1
NC_010278:1625695:1647401164740116491431743Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA primase1e-0860.1
NC_010939:1633000:1650112165011216518541743Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeDNA primase1e-0860.1
NC_012968:2228943:2245658224565822474451788Methylotenera mobilis JLW8, complete genomeDNA primase1e-0860.1
NC_016816:674171:6884636884636902081746Pantoea ananatis LMG 5342, complete genomeDNA primase1e-0860.1
NC_009053:1668500:1686354168635416880961743Actinobacillus pleuropneumoniae L20, complete genomeDNA primase1e-0860.1
NC_009075:2428248:2439215243921524410891875Burkholderia pseudomallei 668 chromosome II, complete sequenceDNA primase1e-0860.1
NC_007650:722961:7238837238837257601878Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase1e-0860.1
NC_014837:3739408:3744398374439837461431746Pantoea sp. At-9b chromosome, complete genomeDNA primase1e-0860.1
NC_007435:1077792:1091879109187910937531875Burkholderia pseudomallei 1710b chromosome II, complete sequenceDNA primase1e-0860.1
NC_006351:2398403:2409370240937024112441875Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA primase1e-0860.1
NC_009078:2351046:2362008236200823638821875Burkholderia pseudomallei 1106a chromosome II, complete sequenceDNA primase1e-0860.1
NC_013016:1441424:1441424144142414431961773Neisseria meningitidis alpha14 chromosome, complete genomeDNA primase3e-0858.9
NC_017187:1511567:1533928153392815355621635Arcobacter butzleri ED-1, complete genomeDNA primase3e-0858.9
NC_015557:1412917:1425300142530014269041605Hydrogenobaculum sp. 3684 chromosome, complete genomeDNA primase3e-0858.9
NC_015587:1414304:1425168142516814267721605Hydrogenobaculum sp. SHO chromosome, complete genomeDNA primase3e-0858.9
NC_014618:690056:7285317285317302761746Enterobacter cloacae SCF1 chromosome, complete genomeDNA primase3e-0858.9
NC_007760:3692798:3706003370600337073611359Anaeromyxobacter dehalogenans 2CP-C, complete genomeDNA primase3e-0858.9
NC_017518:1610803:1610803161080316125751773Neisseria meningitidis NZ-05/33 chromosome, complete genomeDNA primase3e-0858.9
NC_009850:1601982:1619364161936416209981635Arcobacter butzleri RM4018, complete genomeDNA primase3e-0858.9
NC_017511:602000:6188166188166206781863Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeDNA primase2e-0858.9
NC_011126:1430608:1444832144483214464391608Hydrogenobaculum sp. Y04AAS1, complete genomeDNA primase4e-0858.2
NC_008260:2340824:2348052234805223500101959Alcanivorax borkumensis SK2, complete genomeDNA primase4e-0858.2
NC_015663:770485:7704857704857722301746Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA primase4e-0858.2
NC_016625:1259778:1277202127720212790851884Burkholderia sp. YI23 chromosome 2, complete sequenceDNA primase4e-0858.2
NC_017368:468934:4778814778814794911611Helicobacter pylori F16, complete genomeDNA primase8e-0857.4
NC_021182:2219286:2227073222707322288451773Clostridium pasteurianum BC1, complete genomeDNA primase, catalytic core8e-0857.4
NC_012962:3864000:3887807388780738910973291Photorhabdus asymbiotica, complete genomeputative dna primase1e-0756.6
NC_007912:909112:9279379279379299071971Saccharophagus degradans 2-40, complete genomehistidine kinase2e-0756.2
NC_014228:2883500:2895894289589428986562763Xenorhabdus nematophila ATCC 19061, complete genomeDnaG primase-like2e-0756.2
NC_014393:4323368:4326354432635443289602607Clostridium cellulovorans 743B chromosome, complete genomeSigma 54 interacting domain-containing protein2e-0755.8
NC_004545:15650:6038060380621161737Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeDNA primase3e-0755.5
NC_017372:1212000:122274312227431223534792Helicobacter pylori India7 chromosome, complete genomeDNA primase DNA G3e-0755.5
NC_005126:1315474:1324640132464013264511812Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-0755.1
NC_012962:1068102:1086594108659410893622769Photorhabdus asymbiotica, complete genomeputative DNA primase-like protein4e-0755.1
NC_012962:1068102:1094367109436710971352769Photorhabdus asymbiotica, complete genomeputative DNA primase-like protein4e-0755.1
NC_012962:3463644:3473664347366434764322769Photorhabdus asymbiotica, complete genomednag primase-like4e-0755.1
NC_005126:4333767:4360643436064343639693327Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0755.1
NC_005126:589000:6001186001186034443327Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0755.1
NC_005126:1315474:1315474131547413188003327Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0755.1
NC_005126:1265071:1315474131547413188003327Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0755.1
NC_006270:2591317:2607765260776526095881824Bacillus licheniformis ATCC 14580, complete genomeDNA primase6e-0754.7
NC_006322:2592176:2608624260862426104471824Bacillus licheniformis ATCC 14580, complete genomeDNA primase6e-0754.7
NC_015733:443122:4594704594704614521983Pseudomonas putida S16 chromosome, complete genomeDNA primase5e-0754.7
NC_009512:469000:4879214879214899031983Pseudomonas putida F1, complete genomeDNA primase4e-0754.7
NC_015674:1114915:1120449112044911220021554Helicobacter bizzozeronii CIII-1, complete genomeDNA primase6e-0754.3
NC_007005:5500196:5500196550019655021511956Pseudomonas syringae pv. syringae B728a, complete genomeDNA primase6e-0754.3
NC_005126:4333767:4369530436953043728593330Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-0754.3
NC_010003:795355:8399988399988417371740Petrotoga mobilis SJ95, complete genomeDNA primase7e-0754.3
NS_000191:344000:3611163611163628821767Uncultured Termite group 1 bacterium phylotype Rs-D17, completeDNA primase1e-0653.9
NC_020419:344000:3611163611163628821767Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeDNA primase1e-0653.9
NC_004578:568236:5907645907645927221959Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA primase8e-0753.9
NC_021182:4367736:4375034437503443776402607Clostridium pasteurianum BC1, complete genomeDNA primase8e-0753.9
NC_013159:1422370:1422370142237014243431974Saccharomonospora viridis DSM 43017, complete genomeDNA primase8e-0753.9
NC_013132:5942981:5957635595763559603342700Chitinophaga pinensis DSM 2588, complete genomezinc finger CHC2-family protein1e-0653.5
NC_008463:632869:6491246491246511181995Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative DNA primase1e-0653.5
NC_017358:182854:2090322090322106031572Helicobacter pylori Cuz20 chromosome, complete genomeDNA primase DNA G1e-0653.1
NC_002971:1523065:1539492153949215411531662Coxiella burnetii RSA 493, complete genomeDNA primase2e-0653.1
NC_012962:1068102:1101438110143811041372700Photorhabdus asymbiotica, complete genomednag primase-like protein2e-0652.4
NC_012962:1068102:1079149107914910818482700Photorhabdus asymbiotica, complete genomeputative DNA primase-like protein2e-0652.4
NC_012962:3463644:3480735348073534835182784Photorhabdus asymbiotica, complete genomednag primase-like protein2e-0652.4
NC_011761:2067695:2082858208285820846091752Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA primase3e-0652
NC_016629:3396500:3421846342184634236331788Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA primase3e-0652
NC_007644:626992:6464766464766482931818Moorella thermoacetica ATCC 39073, complete genomeDNA primase4e-0651.6
NC_012912:2174183:2194248219424821975023255Dickeya zeae Ech1591, complete genomezinc finger CHC2-family protein8e-0650.8
NC_013235:2129982:2129982212998221319281947Nakamurella multipartita DSM 44233, complete genomeDNA primase9e-0650.4