Pre_GI: BLASTN Hits

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Query: NC_010501:5735656 Pseudomonas putida W619, complete genome

Start: 5735656, End: 5773339, Length: 37684

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome018520BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome017540BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome017450BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome06881BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome06587BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome02549BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete01453BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome01063BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome0961BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome0959BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome0894BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome0892BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome0737BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome0729BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome0662BLASTN svgBLASTP svg
NC_021150:5234000*5234000526129527296Azotobacter vinelandii CA6, complete genome3e-170607BLASTN svgBLASTP svg
NC_012560:5276000*5276000530340327404Azotobacter vinelandii DJ, complete genome3e-170607BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome6e-144519BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome2e-128468BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome8e-122446BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome5e-120440BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-107398BLASTN svgBLASTP svg
NC_005966:159232*15923218289723666Acinetobacter sp. ADP1, complete genome2e-67266BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome5e-52214BLASTN svgBLASTP svg
NC_002488:1099975*1099975114540245428Xylella fastidiosa 9a5c, complete genome1e-34157BLASTN svgBLASTP svg
NC_009092:4585784*4585784461549929716Shewanella loihica PV-4, complete genome6e-33151BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome1e-31147BLASTN svgBLASTP svg
NC_006677:1431500*1431500145622224723Gluconobacter oxydans 621H, complete genome9e-29137BLASTN svgBLASTP svg
NC_018750:5399316*5399316541712617811Streptomyces venezuelae ATCC 10712, complete genome4e-25125BLASTN svgBLASTP svg
NC_015222:386000*38600040759921600Nitrosomonas sp. AL212 chromosome, complete genome6e-24121BLASTN svgBLASTP svg
NC_013714:22038542203854222231018457Bifidobacterium dentium Bd1, complete genome3e-22115BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome1e-21113BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome5e-21111BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome5e-21111BLASTN svgBLASTP svg
NC_004757:230541*23054125274022200Nitrosomonas europaea ATCC 19718, complete genome5e-21111BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome5e-21111BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome5e-21111BLASTN svgBLASTP svg
NC_021177:5697210*5697210572187724668Streptomyces fulvissimus DSM 40593, complete genome5e-21111BLASTN svgBLASTP svg
NC_019673:81143768114376813609921724Saccharothrix espanaensis DSM 44229 complete genome8e-20107BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome8e-20107BLASTN svgBLASTP svg
NC_014363:114239*11423917409959861Olsenella uli DSM 7084 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_010407:20384992038499205674718249Clavibacter michiganensis subsp. sepedonicus chromosome, complete5e-18101BLASTN svgBLASTP svg
NC_015565:27365002736500277293936440Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete5e-18101BLASTN svgBLASTP svg
NC_018720:18782011878201190278524585Bifidobacterium asteroides PRL2011 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_007516:1974500*1974500199561621117Synechococcus sp. CC9605, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_014210:397922*39792241759919678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-1591.7BLASTN svgBLASTP svg
NC_013093:71746367174636719886524230Actinosynnema mirum DSM 43827, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_007508:4593446*4593446461871425269Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008554:3177723*3177723320256524843Syntrophobacter fumaroxidans MPOB, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012856:3615550*3615550364899933450Ralstonia pickettii 12D chromosome 1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013715:14459591445959146809922141Rothia mucilaginosa DY-18, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015589:37118213711821375793046110Desulfotomaculum ruminis DSM 2154 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008009:5139896*5139896517800338108Acidobacteria bacterium Ellin345, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008618:1804610*1804610183073726128Bifidobacterium adolescentis ATCC 15703, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015379:35706583570658359449623839Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1281.8BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence5e-1281.8BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_004556:531000*53100056678535786Xylella fastidiosa Temecula1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010577:530917*53091756659335677Xylella fastidiosa M23, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011750:44905734490573451714226570Escherichia coli IAI39 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010804:78222278222281165029429Burkholderia multivorans ATCC 17616 chromosome 1, complete7e-1177.8BLASTN svgBLASTP svg
NC_007517:16766041676604171020033597Geobacter metallireducens GS-15, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_012483:1408500*1408500144907040571Acidobacterium capsulatum ATCC 51196, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014733:2851984*2851984287799926016Methylovorus sp. MP688 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015968:4790239*4790239481349923261Enterobacter asburiae LF7a chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020260:3931567*3931567395659925033Cronobacter sakazakii Sp291, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011768:4571869*4571869459528523417Desulfatibacillum alkenivorans AK-01, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010717:4851000*4851000487555824559Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003919:4568892*4568892459309924208Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011751:43739614373961440053726577Escherichia coli UMN026 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013203:1447340*1447340147021422875Atopobium parvulum DSM 20469, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015942:30902753090275311959929325Acidithiobacillus ferrivorans SS3 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007513:513806*51380653756623761Synechococcus sp. CC9902, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_006274:50858605085860510874322884Bacillus cereus E33L, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_005957:5037499*5037499507811440616Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-0869.9BLASTN svgBLASTP svg
NC_004722:5194000*5194000525118457185Bacillus cereus ATCC 14579, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-0869.9BLASTN svgBLASTP svg
NC_008600:5046000*5046000510070354704Bacillus thuringiensis str. Al Hakam, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009648:4497749*4497749452411726369Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015696:517941*51794157358855648Francisella sp. TX077308 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015437:816719*81671983509918381Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014335:49695494969549499246722919Bacillus cereus biovar anthracis str. CI chromosome, complete2e-0869.9BLASTN svgBLASTP svg
NC_013037:55878025587802561018522384Dyadobacter fermentans DSM 18053, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012472:50551845055184507809922916Bacillus cereus 03BB102, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_011772:5158680*5158680520959950920Bacillus cereus G9842, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_011059:18965931896593192809931507Prosthecochloris aestuarii DSM 271, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010296:54000540007637922380Microcystis aeruginosa NIES-843, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009052:50899635089963511024820286Shewanella baltica OS155, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_012808:19205001920500194126820769Methylobacterium extorquens AM1, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_018697:1343756*1343756139248048725Cycloclasticus sp. P1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012108:3965433*3965433398469319261Desulfobacterium autotrophicum HRM2, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010498:41669034166903419347126569Escherichia coli SMS-3-5, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete1e-0663.9BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_007498:20878112087811212235934549Pelobacter carbinolicus DSM 2380, complete genome4e-0661.9BLASTN svgBLASTP svg