Pre_GI Gene

Some Help

Host: NC_010407 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010407:2038499 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
203849920399591461F0F1 ATP synthase subunit betaQuickGO ontologyBLASTP
20399952040894900F0F1 ATP synthase subunit gammaQuickGO ontologyBLASTP
204094420426021659F0F1 ATP synthase subunit alphaQuickGO ontologyBLASTP
20426372043428792F0F1 ATP synthase subunit deltaQuickGO ontologyBLASTP
20434282043973546F0F1 ATP synthase subunit BQuickGO ontologyBLASTP
20440062044239234ATP synthase C chainQuickGO ontologyBLASTP
20442862044966681F0F1 ATP synthase subunit AQuickGO ontologyBLASTP
20453022046264963putative insertion element IS1121 transposaseQuickGO ontologyBLASTP
204639320474961104putative aldolaseQuickGO ontologyBLASTP
20478262048815990putative phage resistance proteinQuickGO ontologyBLASTP
205068520534172733phosphoenolpyruvate carboxylaseQuickGO ontologyBLASTP
205352220547481227putative integral membrane efflux proteinQuickGO ontologyBLASTP
20549542055421468hypothetical protein
20555202055858339hypothetical protein
20559382056747810hypothetical proteinBLASTP