Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:4310828 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
431082843125461719Copper-resistance protein CopAQuickGO ontologyBLASTP
43125434313448906Copper resistance B precursorQuickGO ontologyBLASTP
43134804313854375Copper resistance protein CopCQuickGO ontologyBLASTP
43138584314721864Copper resistance DQuickGO ontologyBLASTP
43147184315572855extracellular solute-binding protein family 3QuickGO ontologyBLASTP
43159384316297360hypothetical proteinBLASTP
431659243176141023Transposase IS116IS110IS902QuickGO ontologyBLASTP
43180944318639546PAARQuickGO ontologyBLASTP
43186504319432783hypothetical proteinBLASTP
43194294319785357hypothetical proteinBLASTP
43198944320613720hypothetical proteinBLASTP
43207384321580843hypothetical proteinBLASTP
432157743226831107hypothetical proteinBLASTP
43230954323988894hypothetical proteinBLASTP
43243334325328996Dihydrouridine synthase TIM-barrel protein yjbNQuickGO ontologyBLASTP
43253564325784429hypothetical protein
43257854326618834Undecaprenol kinaseQuickGO ontologyBLASTP
43272124327865654Response regulator receiver domain protein CheYQuickGO ontologyBLASTP
43281574328816660Response regulator receiver domain protein CheYQuickGO ontologyBLASTP
432919943305931395sugar transferaseQuickGO ontologyBLASTP
433095643330342079Protein of unknown function DUF940QuickGO ontologyBLASTP
43330314333762732hypothetical proteinBLASTP
43337924334457666hypothetical proteinBLASTP
433446943355841116Polysaccharide export proteinQuickGO ontologyBLASTP
433613943371671029UDP-glucose 4-epimeraseQuickGO ontologyBLASTP