Pre_GI: BLASTN Hits

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Query: NC_010159:3779129 Yersinia pestis Angola, complete genome

Start: 3779129, End: 3801086, Length: 21958

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated prior to 1985 and belongs to the antiqua biovar. It can ferment rhamnonse and melibiose which is a property usually associated with Yersinia pseudotuberculosis. Strain Angola belongs to a group of atypical Yersinia pestis strains with genotypic similarities that are intermediate between Y. pestis and Y. pseudotuberuclosis strains. Genotypic studies indicate that strain Angola is the oldest Y. pestis strain analyzed to date. It carries three plasmids that are similar to other Y. pestis plasmids but have aberrant sizes. The critical virulence factor, the V antigen, is different than that encoded by typical strains of Y. pestis and there is a deletion that affects the F1 operon. Strain Angola has been shown to be virulent by aerosol in mice.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008150:26813272681327270532824002Yersinia pestis Antiqua, complete genome042740BLASTN svgBLASTP svg
NC_008149:13171091317109134111024002Yersinia pestis Nepal516, complete genome042740BLASTN svgBLASTP svg
NC_005810:27398782739878276387423997Yersinia pestis biovar Microtus str. 91001, complete genome042710BLASTN svgBLASTP svg
NC_010465:12730001273000129080517806Yersinia pseudotuberculosis YPIII, complete genome033310BLASTN svgBLASTP svg
NC_004088:13872761387276140629619021Yersinia pestis KIM, complete genome033060BLASTN svgBLASTP svg
NC_003143:29922952992295301138119087Yersinia pestis CO92, complete genome033060BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome030350BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome026150BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,01039BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome4e-48200BLASTN svgBLASTP svg
NC_012962:34636443463644349841134768Photorhabdus asymbiotica, complete genome5e-26127BLASTN svgBLASTP svg
NC_012779:19662051966205198609919895Edwardsiella ictaluri 93-146, complete genome2e-22115BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome3e-18101BLASTN svgBLASTP svg
NC_010465:42909542909545249323399Yersinia pseudotuberculosis YPIII, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_003143:1033500*1033500105953426035Yersinia pestis CO92, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004088:3661601*3661601368761226012Yersinia pestis KIM, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_005810:3964468*3964468399026325796Yersinia pestis biovar Microtus str. 91001, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008149:35294283529428355543826011Yersinia pestis Nepal516, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008150:36122436122439094629723Yersinia pestis Antiqua, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010159:138879*13887916617427296Yersinia pestis Angola, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010465:933488*93348895909925612Yersinia pseudotuberculosis YPIII, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010067:17105317105319109420042Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-1385.7BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012912:40718594071859411755145693Dickeya zeae Ech1591, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013592:20591382059138209167632539Dickeya dadantii Ech586, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003198:27694492769449279300723559Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-1177.8BLASTN svgBLASTP svg
NC_004631:27553062755306277886423559Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-1177.8BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013592:2338403*2338403235809919697Dickeya dadantii Ech586, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-1177.8BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_011149:28298112829811285287123061Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0971.9BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-0971.9BLASTN svgBLASTP svg
NC_010102:28817142881714290709925386Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0971.9BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011080:28979772897977291952121545Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-0763.9BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str7e-0763.9BLASTN svgBLASTP svg
NC_014306:24763162476316249830421989Erwinia billingiae Eb661, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002695:45841774584177463575951583Escherichia coli O157:H7 str. Sakai, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002655:46531604653160470328250123Escherichia coli O157:H7 EDL933, complete genome3e-0661.9BLASTN svgBLASTP svg