Pre_GI: BLASTP Hits

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Query: NC_009012:1857845:1863582 Clostridium thermocellum ATCC 27405, complete genome

Start: 1863582, End: 1864706, Length: 1125

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012658:1658505:1670222167022216713341113Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative DNA-binding protein1e-30134
NC_017297:1700000:1711041171104117121531113Clostridium botulinum F str. 230613 chromosome, complete genomeputative DNA-binding protein4e-30132
NC_009699:1698951:1710908171090817120201113Clostridium botulinum F str. Langeland chromosome, complete genomeDNA-binding protein4e-30132
NC_007907:4956500:496382249638224964049228Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1479.7
NC_016048:797762:8317148317148327841071Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein9e-1478.2
NC_011830:1037520:105910110591011059934834Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family3e-1376.3
NC_010001:109893:129389129389129880492Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family1e-0964.7
NC_016048:1930089:194775419477541948359606Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein1e-0964.7
NC_009012:2927793:293408629340862934514429Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family1e-0964.3
NC_012891:1277966:129143912914391292212774Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-0964.3
NC_014624:828943:829811829811830257447Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0964.3
NC_015977:3011177:302804130280413028793753Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-0963.5
NC_014915:3320768:335612833561283356535408Geobacillus sp. Y412MC52 chromosome, complete genomehelix-turn-helix domain protein4e-0962.8
NC_013411:3314799:335015933501593350566408Geobacillus sp. Y412MC61, complete genometranscriptional regulator, XRE family4e-0962.8
NC_014206:3355156:337460433746043375011408Geobacillus sp. C56-T3 chromosome, complete genomeXRE family transcriptional regulator4e-0962.8
NC_020210:3246839:326198032619803262387408Geobacillus sp. GHH01, complete genometranscriptional regulator4e-0962.8
NC_011772:1011220:101541510154151015864450Bacillus cereus G9842, complete genomehypothetical protein6e-0962.4
NC_019897:73957:123516123516123968453Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator7e-0962
NC_009328:293000:362637362637363419783Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein8e-0961.6
NC_003997:1007139:101333710133371013558222Bacillus anthracis str. Ames, complete genomeDNA-binding protein2e-0860.8
NC_004193:2921103:293865229386522939191540Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-0860.8
NC_005957:1037205:104193210419321042381450Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator; possible DNA-binding protein1e-0860.8
NC_005945:1008000:101323210132321013510279Bacillus anthracis str. Sterne, complete genomeDNA-binding protein2e-0860.5
NC_010184:1017000:102191410219141022363450Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, XRE family2e-0860.5
NC_007530:1007140:101333810133381013787450Bacillus anthracis str. 'Ames Ancestor', complete genomedna-binding protein2e-0860.1
NC_012659:1008028:101323810132381013687450Bacillus anthracis str. A0248, complete genomehypothetical protein2e-0860.1
NC_011773:1050000:105554110555411055990450Bacillus cereus AH820 chromosome, complete genomehypothetical protein2e-0860.1
NC_016779:991298:994401994401994850450Bacillus cereus F837/76 chromosome, complete genomeXRE family transcriptional regulator2e-0860.1
NC_015428:193817:204686204686204910225Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0859.7
NC_010001:69000:909309093091751822Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family4e-0859.7
NC_015738:629297:632870632870633292423Eggerthella sp. YY7918, complete genomehypothetical protein5e-0859.3
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator4e-0859.3
NC_017208:1050414:105646110564611056910450Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional repressor4e-0859.3
NC_004722:1008500:101368010136801014129450Bacillus cereus ATCC 14579, complete genomeTranscriptional repressor5e-0858.9
NC_011725:1032500:103773410377341038183450Bacillus cereus B4264 chromosome, complete genomehypothetical protein6e-0858.9
NC_015738:220000:232818232818233381564Eggerthella sp. YY7918, complete genomehypothetical protein9e-0858.2
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein9e-0858.2
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein2e-0757.4
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator2e-0757.4
NC_013385:90331:106210106210106566357Ammonifex degensii KC4, complete genometranscriptional regulator, XRE family2e-0757.4
NC_015732:982774:9996799996791000284606Spirochaeta caldaria DSM 7334 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0757
NC_015601:627217:628845628845629261417Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeXRE family transcriptional regulator2e-0757
NC_012791:2590500:260313226031322603551420Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-0757
NC_014759:4133809:415013541501354150905771Marivirga tractuosa DSM 4126 chromosome, complete genomehelix-turn-helix domain protein2e-0757
NC_018720:1336839:134774913477491348339591Bifidobacterium asteroides PRL2011 chromosome, complete genomeDNA-binding protein3e-0756.6
NC_015977:2966971:298258929825892983200612Roseburia hominis A2-183 chromosome, complete genomehypothetical protein3e-0756.6
NC_013730:1948484:195941219594121959813402Spirosoma linguale DSM 74, complete genometranscriptional regulator, XRE family3e-0756.6
NC_013721:533048:557357557357558343987Gardnerella vaginalis 409-05, complete genomeDNA-binding protein3e-0756.2
NC_021184:3497000:350753735075373508112576Desulfotomaculum gibsoniae DSM 7213, complete genomeputative transcription factor, MBF1 like protein4e-0755.8
NC_014479:509919:530075530075530860786Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehelix-turn-helix domain-containing protein4e-0755.8
NC_014964:2272413:229248922924892292878390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein6e-0755.5
NC_012121:474144:476674476674476997324Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative repressor, phage associated6e-0755.5
NC_012925:1357783:137191913719191372440522Streptococcus suis P1/7, complete genomeDNA-binding phage protein8e-0755.1
NC_009442:1446508:146064514606451461166522Streptococcus suis 05ZYH33 chromosome, complete genometranscriptional regulator8e-0755.1
NC_009443:1445936:146006914600691460590522Streptococcus suis 98HAH33, complete genometranscriptional regulator8e-0755.1
NC_012924:1446190:146032714603271460848522Streptococcus suis SC84, complete genomeDNA-binding phage protein8e-0755.1
NC_012926:1496510:151066715106671511188522Streptococcus suis BM407 chromosome, complete genomeDNA-binding phage protein8e-0755.1
NC_015589:2878000:287984128798412880455615Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0654.7
NC_014334:2696000:271134127113412711898558Lactobacillus casei str. Zhang chromosome, complete genomeXRE family transcriptional regulator1e-0654.7
NC_015500:2112975:211297521129752113562588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein1e-0654.3
NC_014833:3161257:316420531642053164792588Ruminococcus albus 7 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0654.3
NC_014644:1275038:127837012783701279002633Gardnerella vaginalis ATCC 14019 chromosome, complete genomeXRE family transcriptional regulator2e-0654.3
NC_013165:1780321:179707517970751797665591Slackia heliotrinireducens DSM 20476, complete genomepredicted transcriptional regulator2e-0653.9
NC_007907:1996194:200522520052252006193969Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0653.9
NC_011830:3081726:309011130901113091079969Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family2e-0653.9
NC_012778:403962:424154424154424807654Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0653.9
NC_013721:533048:555423555423556055633Gardnerella vaginalis 409-05, complete genomeDNA-binding protein2e-0653.9
NC_009633:2592000:263151726315172631879363Alkaliphilus metalliredigens QYMF chromosome, complete genomehelix-turn-helix domain-containing protein2e-0653.5
NC_010520:725312:730360730360730752393Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding protein3e-0653.5
NC_013895:117429:164188164188164820633Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDNA-binding protein3e-0653.5
NC_008497:79144:963919639196705315Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator, xre family3e-0653.1
NC_013798:1744118:175405317540531754478426Streptococcus gallolyticus UCN34, complete genomeputative transcriptional regulator3e-0653.1
NC_021182:2536000:253788925378892538323435Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator3e-0653.1
NC_012856:2815797:284609528460952846448354Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, XRE family4e-0652.8
NC_008532:1769733:179009017900901790602513Streptococcus thermophilus LMD-9, complete genomeTranscriptional regulator, xre family6e-0652.4
NC_013198:1095591:110846011084601108798339Lactobacillus rhamnosus GG, complete genomeprophage protein, DNA-binding protein6e-0652.4
NC_010001:69000:899178991790717801Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family5e-0652.4
NC_017068:1327025:134093213409321341534603Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xre family transcriptional regulator8e-0652
NC_012814:1092860:1094496109449610955031008Bifidobacterium animalis subsp. lactis Bl-04, complete genomeXre-type transcriptional regulator9e-0651.6
NC_012815:1092795:1094431109443110954381008Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeXre-type transcriptional regulator9e-0651.6
NC_011835:1819707:1821343182134318223501008Bifidobacterium animalis subsp. lactis AD011 chromosome, completetranscriptional regulator9e-0651.6
NC_017216:1092751:1094387109438710953941008Bifidobacterium animalis subsp. lactis BLC1, complete genometranscriptional regulator9e-0651.6
NC_017217:1092916:1094552109455210955591008Bifidobacterium animalis subsp. lactis V9 chromosome, completeXre-type transcriptional regulator9e-0651.6
NC_017214:1727676:1729273172927317303191047Bifidobacterium animalis subsp. lactis BB-12 chromosome, completetranscriptional regulator8e-0651.6
NC_017215:1091941:1094155109415510952011047Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,transcriptional regulator8e-0651.6
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein9e-0651.6