Pre_GI Gene

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Host: NC_011835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011835:1819707 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18190901819710621hypothetical proteinBLASTP
18197071820585879ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
18205821821001420regulatory protein GntRQuickGO ontologyBLASTP
182134318223501008transcriptional regulatorQuickGO ontologyBLASTP
182241818234431026adenosine deaminaseQuickGO ontologyBLASTP
18234441824205762hypothetical proteinBLASTP
18244401824745306chorismate mutaseQuickGO ontologyBLASTP
18248271825669843hypothetical proteinBLASTP
18256821826068387GNAT family acetyltransferaseQuickGO ontologyBLASTP
18260431826615573adenylate kinase DNA topology modulatorQuickGO ontologyBLASTP
18268251827196372ATPaseQuickGO ontologyBLASTP
182848018297181239tetracycline resistance protein TetWQuickGO ontologyBLASTP
18300671831044978transposase IS4QuickGO ontologyBLASTP
183166018332221563GMP synthaseQuickGO ontologyBLASTP
183370218361792478phosphoketolaseQuickGO ontologyBLASTP
183642018381021683phosphate acetyltransferaseQuickGO ontologyBLASTP
183825818394901233acetate kinaseQuickGO ontologyBLASTP
1839565184095313893-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
1841039184111577tRNA-ProQuickGO ontologyBLASTP
184121918424481230ABC transporter permeaseQuickGO ontologyBLASTP
184251118446492139glycogen debranching protein GlgXQuickGO ontologyBLASTP