Pre_GI Gene

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Host: NC_017216 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017216:1092751 Bifidobacterium animalis subsp. lactis BLC1, complete genome

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10921341092754621hypothetical proteinBLASTP
10927511093629879ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
10936261094045420transcriptional regulator gntR family proteinQuickGO ontologyBLASTP
109438710953941008transcriptional regulatorQuickGO ontologyBLASTP
109546210964871026adenosine deaminaseQuickGO ontologyBLASTP
10964881097249762hypothetical proteinBLASTP
10974841097789306chorismate mutaseQuickGO ontologyBLASTP
10980721098713642hypothetical proteinBLASTP
10987261099112387acetyltransferase GNAT familyQuickGO ontologyBLASTP
10990871099659573DNA topology modulation proteinQuickGO ontologyBLASTP
10998691100240372putative ATPaseQuickGO ontologyBLASTP
110084411027631920ribosomal protection tetracycline resistance proteinQuickGO ontologyBLASTP
11031121104077966transposase IS4 family proteinQuickGO ontologyBLASTP
11041081104509402hypothetical proteinBLASTP
110470511062671563GMP synthaseQuickGO ontologyBLASTP
110674711092242478xylulose-5-phosphatefructose-6-phosphate phosphoketolaseQuickGO ontologyBLASTP
110946511111471683phosphate acetyltransferaseQuickGO ontologyBLASTP
111130311125351233acetate kinaseQuickGO ontologyBLASTP
1112610111399813893-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
1114084111416077tRNA-ProQuickGO ontologyBLASTP
111426411154931230hypothetical proteinBLASTP
111555611176732118glycogen debranching enzyme GlgXQuickGO ontologyBLASTP