Pre_GI Gene

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Host: NC_017215 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017215:1091941 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10919411092561621hypothetical proteinBLASTP
10925581093436879ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
10934331094128696GntR family transcriptional regulatorQuickGO ontologyBLASTP
109415510952011047transcriptional regulatorQuickGO ontologyBLASTP
109517910962851107hypothetical proteinBLASTP
10962951097056762hypothetical proteinBLASTP
10972911097596306Oxo-acid lyaseQuickGO ontologyBLASTP
10975621097723162hypothetical protein
10976781098520843cytosolic proteinQuickGO ontologyBLASTP
10985331098919387hypothetical proteinBLASTP
10988941099493600adenylate kinaseQuickGO ontologyBLASTP
10996761100047372ATPaseQuickGO ontologyBLASTP
11001421100288147hypothetical protein
110063411025531920Tetracycline resistance protein tetWQuickGO ontologyBLASTP
11029021103879978transposaseQuickGO ontologyBLASTP
11038981104299402hypothetical proteinBLASTP
110449511060571563GMP synthaseQuickGO ontologyBLASTP
110651311090142502Fructose-6-phosphate phosphoketolaseQuickGO ontologyBLASTP
110906911109371869phosphate acetyltransferaseQuickGO ontologyBLASTP
111104211123251284acetate kinaseQuickGO ontologyBLASTP
1112388111377613893-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
1113862111393877tRNA-ProQuickGO ontologyBLASTP
111402111152711251TransporterQuickGO ontologyBLASTP