Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:1797000:1813458 Clostridium novyi NT, complete genome

Start: 1813458, End: 1814336, Length: 879

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2024154:203892720389272039733807Clostridium botulinum BKT015925 chromosome, complete genomecation efflux family protein5e-126450
NC_009495:1368000:138862813886281389503876Clostridium botulinum A str. ATCC 3502 chromosome, complete genomecation efflux family protein2e-91335
NC_010320:1769486:178158717815871782468882Thermoanaerobacter sp. X514 chromosome, complete genomecation diffusion facilitator family transporter1e-83309
NC_014538:73272:827728277283653882Thermoanaerobacter sp. X513 chromosome, complete genomecation diffusion facilitator family transporter1e-83309
NC_017179:4023139:404909240490924050003912Clostridium difficile BI1, complete genomehypothetical protein6e-83307
NC_013315:4015119:404107240410724041983912Clostridium difficile CD196 chromosome, complete genomehypothetical protein6e-83307
NC_013316:4095905:412185841218584122769912Clostridium difficile R20291, complete genomehypothetical protein6e-83307
NC_010718:517473:5196325196325206961065Natranaerobius thermophilus JW/NM-WN-LF, complete genomecation diffusion facilitator family transporter3e-56218
NC_008601:753221:7806667806667818051140Francisella tularensis subsp. novicida U112, complete genomepredicted Co/Zn/Cd cation transporter5e-50197
NC_011725:4373721:438898243889824389875894Bacillus cereus B4264 chromosome, complete genomecation efflux family protein4e-46184
NC_004722:4333643:434574743457474346640894Bacillus cereus ATCC 14579, complete genomeCobalt-zinc-cadmium resistance protein czcD5e-46184
NC_016051:1429800:143378514337851434645861Thermococcus sp. AM4 chromosome, complete genomecobalt-zinc-cadmium efflux protein1e-44180
NC_011529:1554500:157498615749861575849864Thermococcus onnurineus NA1, complete genomecobalt/zinc/cadmium cation efflux pump protein1e-43176
NC_015144:734726:756169756169757092924Weeksella virosa DSM 16922 chromosome, complete genomecation diffusion facilitator family transporter1e-41170
NC_014121:2330451:234524323452432346181939Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeCo/Zn/Cd cation transporter6e-40164
NC_014618:57707:634006340064323924Enterobacter cloacae SCF1 chromosome, complete genomecation diffusion facilitator family transporter1e-39163
NC_015164:2859000:287106328710632871965903Bacteroides salanitronis DSM 18170 chromosome, complete genomecation diffusion facilitator family transporter2e-39163
NC_009649:16907:261932619327146954Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,Co/Zn/Cd cation transporter3e-39162
NC_012658:1658505:167154816715481672417870Clostridium botulinum Ba4 str. 657 chromosome, complete genomecation efflux family protein8e-39160
NC_009699:1698951:171500217150021715871870Clostridium botulinum F str. Langeland chromosome, complete genomecation efflux family protein1e-38160
NC_007651:3560652:3596237359623735974931257Burkholderia thailandensis E264 chromosome I, complete sequencecation efflux family protein1e-37157
NC_006350:3865584:3894921389492138961111191Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative cation efflux protein1e-37156
NC_016935:517054:525286525286526182897Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-37156
NC_012731:2739964:276035927603592761285927Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative cation efflux system2e-36153
NC_016845:2781438:280076928007692801692924Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative cation efflux system2e-36153
NC_006371:1973500:197586419758641976691828Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical cation-efflux family protein8e-36150
NC_008576:2868986:287546728754672876351885Magnetococcus sp. MC-1, complete genomecation diffusion facilitator family transporter6e-35148
NC_013406:2866000:290246829024682903337870Paenibacillus sp. Y412MC10 chromosome, complete genomecation diffusion facilitator family transporter2e-34145
NC_010556:316996:351288351288352157870Exiguobacterium sibiricum 255-15, complete genomecation diffusion facilitator family transporter2e-33142
NC_020389:1777409:177852417785241779444921Methanosarcina mazei Tuc01, complete genomeCobalt-zinc-cadmium resistance protein4e-33142
NC_012856:2633890:265294326529432653866924Ralstonia pickettii 12D chromosome 1, complete genomecation diffusion facilitator family transporter8e-33140
NC_014377:149288:155470155470156360891Thermosediminibacter oceani DSM 16646 chromosome, complete genomecation diffusion facilitator family transporter1e-32140
NC_014410:2329838:233436723343672335224858Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,cation diffusion facilitator family transporter3e-32139
NC_007348:1903937:191061319106131911524912Ralstonia eutropha JMP134 chromosome 2, complete sequenceCation efflux protein9e-32137
NC_010682:1763769:176376917637691764692924Ralstonia pickettii 12J chromosome 1, complete sequencecation diffusion facilitator family transporter2e-31136
NC_010682:3033646:305746230574623058385924Ralstonia pickettii 12J chromosome 1, complete sequencecation diffusion facilitator family transporter2e-31136
NC_010682:1652636:167706716770671677990924Ralstonia pickettii 12J chromosome 1, complete sequencecation diffusion facilitator family transporter1e-31136
NC_008533:1380406:1404277140427714054611185Streptococcus pneumoniae D39, complete genomecation efflux family protein3e-31135
NC_003098:1372875:1396746139674613979301185Streptococcus pneumoniae R6, complete genomehypothetical protein3e-31135
NC_004663:1409462:142551114255111426434924Bacteroides thetaiotaomicron VPI-5482, complete genomecation efflux family protein3e-30132
NC_021175:353292:3700733700733712631191Streptococcus oligofermentans AS 1.3089, complete genomecation efflux family protein1e-29130
NC_009455:273519:318969318969319904936Dehalococcoides sp. BAV1 chromosome, complete genomecation diffusion facilitator family transporter1e-29130
NC_007626:1038214:106843010684301069320891Magnetospirillum magneticum AMB-1, complete genomePredicted Co/Zn/Cd cation transporters4e-29128
NC_014658:743453:7620577620577632351179Methanothermus fervidus DSM 2088 chromosome, complete genomecation diffusion facilitator family transporter9e-28124
NC_007681:600187:614403614403615293891Methanosphaera stadtmanae DSM 3091, complete genomepredicted Co/Zn/Cd cation transporter2e-27122
NC_008576:2868986:288392328839232884921999Magnetococcus sp. MC-1, complete genomecation diffusion facilitator family transporter1e-26120
NC_016584:954000:955131955131956093963Desulfosporosinus orientis DSM 765 chromosome, complete genomecation diffusion facilitator family transporter2e-25116
NC_018607:135612:137753137753138634882Brachyspira pilosicoli B2904 chromosome, complete genomecation efflux system protein2e-25116
NC_013192:664408:6773176773176785641248Leptotrichia buccalis DSM 1135, complete genomecation diffusion facilitator family transporter1e-24114
NC_015275:3761889:377938637793863780273888Clostridium lentocellum DSM 5427 chromosome, complete genomecation diffusion facilitator family transporter1e-24114
NC_008726:3947917:3961200396120039623451146Mycobacterium vanbaalenii PYR-1, complete genomecation diffusion facilitator family transporter6e-23108
NC_012438:132456:1353191353191365001182Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomecation diffusion facilitator family transporter1e-21103
NC_008343:88184:105780105780106700921Granulibacter bethesdensis CGDNIH1, complete genomecobalt-zinc-cadmium resistance protein czcD2e-21103
NC_018681:867230:8975308975308985971068Nocardia brasiliensis ATCC 700358 chromosome, complete genomeCDF family transporter3e-21102
NC_009481:764382:767692767692768597906Synechococcus sp. WH 7803 chromosome, complete genomeCo/Zn/Cd cation transporter3e-21102
NC_014314:69872:897418974190676936Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completecation diffusion facilitator family transporter8e-21100
NC_009725:2784334:280086728008672801736870Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein1e-20100
NC_008554:3177723:318136931813693182301933Syntrophobacter fumaroxidans MPOB, complete genomecation diffusion facilitator family transporter1e-20100
NC_007626:1038214:1038214103821410392151002Magnetospirillum magneticum AMB-1, complete genomePredicted Co/Zn/Cd cation transporters1e-20100
NC_015672:203139:205428205428206342915Flexistipes sinusarabici DSM 4947 chromosome, complete genomecation diffusion facilitator family transporter5e-2098.2
NC_012526:1345597:136513013651301366014885Deinococcus deserti VCD115, complete genomeputative cation efflux tranporter; putative membrane protein1e-1997.4
NC_015873:1119500:1133734113373411349121179Megasphaera elsdenii DSM 20460, complete genomecation diffusion facilitator family transporter4e-1995.5
NC_004557:2607073:2607073260707326082571185Clostridium tetani E88, complete genomecobalt-zinc-cadmium resistance protein czcD5e-1995.1
NC_014666:4118000:4118048411804841191091062Frankia sp. EuI1c chromosome, complete genomecation diffusion facilitator family transporter6e-1891.7
NC_021182:1188000:1206782120678212079631182Clostridium pasteurianum BC1, complete genomecation diffusion facilitator family transporter1e-1790.5
NC_013170:917177:9288299288299299381110Cryptobacterium curtum DSM 15641, complete genomecation diffusion facilitator family transporter2e-1790.1
NC_014363:1680578:1683349168334916845241176Olsenella uli DSM 7084 chromosome, complete genomecation diffusion facilitator family transporter2e-1790.1
NC_013960:489616:491010491010491933924Nitrosococcus halophilus Nc4 chromosome, complete genomecation diffusion facilitator family transporter2e-1789.4
NC_009051:2240480:2246071224607122473211251Methanoculleus marisnigri JR1, complete genomecation diffusion facilitator family transporter9e-1787.8
NC_010322:5349000:539425853942585395130873Pseudomonas putida GB-1 chromosome, complete genomecation diffusion facilitator family transporter1e-1687
NC_015671:3093596:3105989310598931070711083Cellvibrio gilvus ATCC 13127 chromosome, complete genomecation diffusion facilitator family transporter3e-1685.9
NC_000911:1718820:171964417196441720576933Synechocystis sp. PCC 6803, complete genomehypothetical protein9e-1684.3
NC_017039:1717848:171867217186721719604933Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein9e-1684.3
NC_017052:1717836:171866017186601719592933Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein9e-1684.3
NC_017277:1717637:171846117184611719393933Synechocystis sp. PCC 6803, complete genomehypothetical protein9e-1684.3
NC_013520:1860286:1860286186028618614101125Veillonella parvula DSM 2008, complete genomecation diffusion facilitator family transporter3e-1582.8
NC_008309:502983:523429523429524325897Haemophilus somnus 129PT, complete genomecation efflux protein3e-1582.8
NC_017191:467207:496406496406497341936Bacillus amyloliquefaciens XH7 chromosome, complete genomepotassium/proton-divalent cation antiporter4e-1582
NC_017190:466236:488847488847489782936Bacillus amyloliquefaciens LL3 chromosome, complete genomeCadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD4e-1582
NC_017188:461177:490384490384491319936Bacillus amyloliquefaciens TA208 chromosome, complete genomeCadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD4e-1582
NC_014915:3039639:303963930396393040589951Geobacillus sp. Y412MC52 chromosome, complete genomecation diffusion facilitator family transporter5e-1582
NC_013743:375459:399814399814400725912Haloterrigena turkmenica DSM 5511, complete genomecation diffusion facilitator family transporter6e-1581.6
NC_002932:1851070:1862799186279918639651167Chlorobium tepidum TLS, complete genomecation efflux family protein5e-1581.6
NC_019896:1483073:150177715017771502712936Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeCation transport protein YrdO (Cation-efflux system membrane protein)8e-1581.3
NC_020244:2509000:253855725385572539504948Bacillus subtilis XF-1, complete genomepotassium/proton-divalent cation antiporter1e-1480.9
NC_013223:1188500:1203378120337812044181041Desulfohalobium retbaense DSM 5692, complete genomecation diffusion facilitator family transporter1e-1480.9
NC_014366:1814000:182523918252391826174936Gamma proteobacterium HdN1, complete genomeCation efflux protein1e-1480.5
NC_013410:3017983:3034904303490430360251122Fibrobacter succinogenes subsp. succinogenes S85 chromosome,cation diffusion facilitator family transporter1e-1480.5
NC_014551:483773:502908502908503843936Bacillus amyloliquefaciens DSM 7, complete genomeCadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD2e-1479.7
NC_020410:495184:522015522015522956942Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completepotassium/proton-divalent cation antiporter2e-1479.7
NC_010803:483713:483713483713484708996Chlorobium limicola DSM 245, complete genomecation diffusion facilitator family transporter4e-1479
NC_016012:104500:1201791201791213511173Candidatus Arthromitus sp. SFB-rat-Yit, complete genomecobalt-zinc-cadmium resistance protein czcD5e-1478.6
NC_011884:393328:405983405983406891909Cyanothece sp. PCC 7425, complete genomecation diffusion facilitator family transporter8e-1477.8
NC_020272:3396800:340821534082153409156942Bacillus amyloliquefaciens IT-45, complete genomeCadmium, cobalt and zinc/H(+)-K(+) antiporter9e-1477.8
NC_019842:484933:529700529700530641942Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Cadmium, cobalt and zinc/H(+)-K(+) antiporter4e-1375.5
NC_014315:1435243:144414914441491445105957Nitrosococcus watsoni C-113 chromosome, complete genomecation diffusion facilitator family transporter5e-1375.5
NC_003552:5402000:5422434542243454234591026Methanosarcina acetivorans C2A, complete genomehypothetical protein6e-1375.1
NC_011567:388358:407650407650408624975Anoxybacillus flavithermus WK1, complete genomeCo/Zn/Cd efflux system component6e-1374.7
NC_009725:496443:537934537934538875942Bacillus amyloliquefaciens FZB42, complete genomeCzcD1e-1273.9
NC_013525:1221604:1230453123045312314811029Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomecation diffusion facilitator family transporter1e-1273.9
NC_013741:424278:427846427846428763918Archaeoglobus profundus DSM 5631, complete genomecation diffusion facilitator family transporter2e-1273.2
NC_017297:1700000:171513617151361715486351Clostridium botulinum F str. 230613 chromosome, complete genome5e-1271.6
NC_017047:3174588:318468131846813185592912Rahnella aquatilis HX2 chromosome, complete genomecation diffusion facilitator family transporter8e-1271.2
NC_015061:3111211:312130431213043122215912Rahnella sp. Y9602 chromosome, complete genomecation diffusion facilitator family transporter8e-1271.2
NC_013173:2305394:232801823280182328959942Desulfomicrobium baculatum DSM 4028, complete genomecation diffusion facilitator family transporter1e-1170.9
NC_016593:596500:608815608815609762948Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completecation diffusion facilitator family transporter1e-1170.9
NC_006510:591339:605192605192606139948Geobacillus kaustophilus HTA426, complete genomecation efflux transporter1e-1170.9
NC_000963:1024000:104551610455161046418903Rickettsia prowazekii str. Madrid E, complete genomePROTEIN P34 (p34)1e-1170.5
NC_017048:225980:275948275948276850903Rickettsia prowazekii str. GvV257 chromosome, complete genomeprotein P34 (p34)1e-1170.5
NC_017049:1022000:104379710437971044699903Rickettsia prowazekii str. Chernikova chromosome, complete genomeprotein P34 (p34)1e-1170.5
NC_017050:1024000:104544710454471046349903Rickettsia prowazekii str. Katsinyian chromosome, complete genomeprotein P34 (p34)1e-1170.5
NC_017057:1024000:104610210461021047004903Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeprotein P34 (p34)1e-1170.5
NC_008698:1612873:1632509163250916338611353Thermofilum pendens Hrk 5, complete genomecation diffusion facilitator family transporter6e-1168.6
NC_015703:2693463:2697594269759426986221029Runella slithyformis DSM 19594 chromosome, complete genomecation diffusion facilitator family transporter8e-1167.8
NC_011026:2624775:262743226274322628379948Chloroherpeton thalassium ATCC 35110, complete genomecation diffusion facilitator family transporter9e-1167.8
NC_013205:1123280:117472911747291175682954Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,cation diffusion facilitator family transporter3e-1065.9
NC_014314:69872:856928569286642951Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completecation diffusion facilitator family transporter5e-1065.5
NC_007298:1129889:114298711429871143949963Dechloromonas aromatica RCB, complete genomeCation efflux protein5e-1065.5
NC_002947:8394:304313043131336906Pseudomonas putida KT2440, complete genomecobalt/cadmium/zinc transporter, CDF family5e-0962
NC_009512:27783:424074240743312906Pseudomonas putida F1, complete genomecation diffusion facilitator family transporter5e-0962
NC_010501:30000:471234712348028906Pseudomonas putida W619, complete genomecation diffusion facilitator family transporter5e-0962
NC_010322:29983:431894318944094906Pseudomonas putida GB-1 chromosome, complete genomecation diffusion facilitator family transporter5e-0962
NC_009138:1583988:159495115949511595865915Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcD4e-0962
NC_015733:5909821:592456659245665925408843Pseudomonas putida S16 chromosome, complete genomeCDF family cobalt/cadmium/zinc transporter1e-0860.8
NC_014500:177824:194729194729195631903Dickeya dadantii 3937 chromosome, complete genomezinc transporter2e-0859.7
NC_017986:2548720:257660925766092577514906Pseudomonas putida ND6 chromosome, complete genomecation diffusion facilitator family transporter3e-0859.3
NC_016048:1390463:1416952141695214181271176Oscillibacter valericigenes Sjm18-20, complete genomeputative cation efflux protein8e-0858.2
NC_008699:1673181:171687417168741717815942Nocardioides sp. JS614, complete genomecation diffusion facilitator family transporter9e-0857.8
NC_015554:1653614:165361416536141654525912Alteromonas sp. SN2 chromosome, complete genomeCo/Zn/Cd efflux system protein1e-0757.4
NC_012214:124337:124337124337125239903Erwinia pyrifoliae Ep1/96, complete genomeCation-efflux pump FieF1e-0757
NC_016776:3181706:318170631817063182614909Bacteroides fragilis 638R, complete genomeputative metal transport-related membrane protein1e-0757
NC_006347:3082921:308292130829213083829909Bacteroides fragilis YCH46, complete genomecation efflux system protein2e-0757
NC_003228:3143470:314574531457453146653909Bacteroides fragilis NCTC 9343, complete genomeputative metal transport-related membrane protein2e-0757
NC_015690:3883243:388656838865683887515948Paenibacillus mucilaginosus KNP414 chromosome, complete genomecation diffusion facilitator family transporter3e-0756.2
NC_013162:1130554:114377911437791144723945Capnocytophaga ochracea DSM 7271, complete genomecation diffusion facilitator family transporter8e-0754.7
NC_016109:7631165:7650726765072676517751050Kitasatospora setae KM-6054, complete genomeputative cation efflux protein1e-0654.3
NC_008711:424482:427294427294428214921Arthrobacter aurescens TC1, complete genomecobalt-zinc-cadmium efflux permease1e-0654.3
NC_017904:3084872:310690231069023107864963Mycobacterium sp. MOTT36Y chromosome, complete genomemetal transport protein1e-0654.3
NC_009434:3611738:370382237038223704742921Pseudomonas stutzeri A1501, complete genomecation efflux system protein9e-0754.3
NC_015953:2512152:2530831253083125318441014Streptomyces sp. SirexAA-E chromosome, complete genomecation diffusion facilitator family transporter1e-0653.9
NC_017904:4742775:4747272474727247483031032Mycobacterium sp. MOTT36Y chromosome, complete genomemetal transport protein2e-0653.1
NC_017904:4742775:477248847724884773411924Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein3e-0652.8
NC_008345:4107847:412508241250824125984903Shewanella frigidimarina NCIMB 400, complete genomecation diffusion facilitator family transporter3e-0652.4
NC_020126:2299150:230556623055662306519954Myxococcus stipitatus DSM 14675, complete genomecation efflux family protein4e-0652
NC_008750:1253354:1272501127250112735291029Shewanella sp. W3-18-1, complete genomecation diffusion facilitator family transporter9e-0651.2