Pre_GI Gene

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Host: NC_010803 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010803:483713 Chlorobium limicola DSM 245, complete genome

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
483713484708996cation diffusion facilitator family transporterQuickGO ontologyBLASTP
4847684857691002NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
486063486482420cytochrome c class IQuickGO ontologyBLASTP
486497487330834hypothetical proteinBLASTP
487506487775270hypothetical protein
488375489355981hypothetical proteinBLASTP
489413490213801CRISPR-associated protein Cas6QuickGO ontologyBLASTP
4903154913971083hypothetical protein
491387492178792hypothetical protein
4921714935591389CRISPR-associated CXXC_CXXC protein Cst1QuickGO ontologyBLASTP
4935824946071026CRISPR-associated autoregulator DevR familyQuickGO ontologyBLASTP
494610495230621CRISPR-associated protein Cas5 familyQuickGO ontologyBLASTP
4952324974842253CRISPR-associated helicase Cas3QuickGO ontologyBLASTP
4974894986431155CRISPR-associated protein Cas1QuickGO ontologyBLASTP
498775499035261CRISPR-associated protein Cas2QuickGO ontologyBLASTP
499042499542501CRISPR-associated protein Cas4QuickGO ontologyBLASTP