Pre_GI: BLASTP Hits

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Query: NC_008258:269806:276837 Shigella flexneri 5 str. 8401, complete genome

Start: 276837, End: 277199, Length: 363

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Shigella spp. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:309833:317867317867318229363Shigella flexneri 2a str. 301, complete genomeputative flippase1e-55214
NC_004741:310382:323692323692324054363Shigella flexneri 2a str. 2457T, complete genomeputative flippase1e-55214
NC_011740:621408:630857630857631219363Escherichia fergusonii ATCC 35469, complete genomebactoprenol-linked glucose translocase (flippase) ; CPS-53 (KpLE1) prophage2e-52203
NC_017328:335160:347064347064347426363Shigella flexneri 2002017 chromosome, complete genomeBactoprenol-linked glucose translocase3e-51200
AC_000091:2462461:247330124733012473663363Escherichia coli W3110 DNA, complete genomebactoprenol-linked glucose translocase (flippase)1e-50197
NC_010473:2548946:255764225576422558004363Escherichia coli str. K-12 substr. DH10B, complete genomeCPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)1e-50197
NC_000913:2455037:246587724658772466239363Escherichia coli K12, complete genomeCPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)1e-50197
NC_012759:2342986:235168223516822352044363Escherichia coli BW2952 chromosome, complete genomeCPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)1e-50197
NC_011149:588895:600206600206600568363Salmonella enterica subsp. enterica serovar Agona str. SL483,bactoprenol-linked glucose translocase4e-47186
NC_011080:610428:621769621769622131363Salmonella enterica subsp. enterica serovar Newport str. SL254,bactoprenol-linked glucose translocase4e-47186
NC_006511:2251022:225684622568462257208363Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbactoprenol-linked glucose translocase6e-47185
NC_003197:606048:617360617360617722363Salmonella typhimurium LT2, complete genomeputative glycosyl translocase6e-47185
NC_006511:2467763:248678024867802487142363Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCO-antigen conversion: glucosyl transferase6e-47185
NC_004631:2366335:237142323714232371785363Salmonella enterica subsp. enterica serovar Typhi Ty2, completebactoprenol-linked glucose translocase6e-47185
NC_006905:651732:667560667560667922363Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycosyl translocase6e-47185
NC_003198:598000:609316609316609678363Salmonella enterica subsp. enterica serovar Typhi str. CT18,bactoprenol-linked glucose translocase6e-47185
NC_011083:654479:665790665790666152363Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bactoprenol-linked glucose translocase6e-47185
NC_011274:603901:615191615191615553363Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91bactoprenol-linked glucose translocase8e-47185
NC_012125:600586:616406616406616768363Salmonella enterica subsp. enterica serovar Paratyphi C strainglycosyl translocase9e-47185
NC_006905:651732:660997660997661359363Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycosyl translocase6e-47185
NC_011094:688626:700281700281700643363Salmonella enterica subsp. enterica serovar Schwarzengrund strbactoprenol-linked glucose translocase6e-47185
NC_011147:2247460:225203022520302252392363Salmonella enterica subsp. enterica serovar Paratyphi A strbactoprenol-linked glucose translocase6e-47185
NC_016863:606742:618053618053618415363Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1CDP-6-deoxy-delta-3,4-glucoseen reductase6e-47185
NC_016860:644095:655407655407655769363Salmonella enterica subsp. enterica serovar Typhimurium strputative glucose translocase6e-47185
NC_016857:604792:616848616848617210363Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bactoprenol-linked glucose translocase6e-47185
NC_016856:606742:618054618054618416363Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glycosyl translocase6e-47185
NC_016810:604813:616848616848617210363Salmonella enterica subsp. enterica serovar Typhimurium strbactoprenol-linked glucose translocase6e-47185
NC_012125:600586:609844609844610206363Salmonella enterica subsp. enterica serovar Paratyphi C strainglycosyl translocase6e-47185
NC_011294:585500:596818596818597180363Salmonella enterica subsp. enterica serovar Enteritidis strbactoprenol-linked glucose translocase6e-47185
NC_011205:645591:662352662352662714363Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bactoprenol-linked glucose translocase6e-47185
NC_011147:2463299:248231624823162482678363Salmonella enterica subsp. enterica serovar Paratyphi A strbactoprenol-linked glucose translocase6e-47185
NC_011083:403022:415404415404415766363Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bactoprenol-linked glucose translocase1e-45181
NC_011205:645591:657950657950658312363Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bactoprenol-linked glucose translocase1e-45181
NC_016860:397138:409566409566409928363Salmonella enterica subsp. enterica serovar Typhimurium strbactoprenol-linked glucose translocase1e-45181
NC_006905:401154:412629412629412997369Salmonella enterica subsp. enterica serovar Choleraesuis strBactoprenol-linked glucose translocase2e-45180
NC_006511:529424:540534540534540923390Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbactoprenol-linked glucose transferase3e-43173
NC_004631:531254:542363542363542752390Salmonella enterica subsp. enterica serovar Typhi Ty2, completebactoprenol-linked glucose transferase3e-43173
NC_003198:2453074:246196024619602462349390Salmonella enterica subsp. enterica serovar Typhi str. CT18,bactoprenol-linked glucose transferase3e-43173
NC_011147:529458:540568540568540957390Salmonella enterica subsp. enterica serovar Paratyphi A strbactoprenol-linked glucose transferase3e-43173
NC_011205:2621415:262815626281562628545390Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bactoprenol-linked glucose transferase2e-43173
NC_011274:2483038:249192524919252492314390Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91bactoprenol-linked glucose transferase2e-43173
NC_011294:2492168:250105425010542501443390Salmonella enterica subsp. enterica serovar Enteritidis strbactoprenol-linked glucose transferase2e-43173
NC_009778:2951207:297632529763252976687363Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-39158
NC_016831:2402893:240730424073042407579276Salmonella enterica subsp. enterica serovar Gallinarum/pullorumbactoprenol-linked glucose translocase4e-33139
NC_016832:2363136:236831123683112368586276Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bactoprenol-linked glucose translocase4e-33139
NC_017046:604789:616845616845617120276Salmonella enterica subsp. enterica serovar Typhimurium str. 798bactoprenol-linked glucose translocase4e-33139
NC_010102:2495441:250042525004252500700276Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-32137
NC_014306:3210311:323353332335333233892360Erwinia billingiae Eb661, complete genomeBactoprenol-linked glucose translocase6e-31132
NC_016831:531404:542563542563542874312Salmonella enterica subsp. enterica serovar Gallinarum/pullorumbactoprenol-linked glucose transferase1e-30131
NC_015968:2845751:285455328545532854915363Enterobacter asburiae LF7a chromosome, complete genomeGtrA family protein1e-30131
NC_013956:1207500:121729712172971217665369Pantoea ananatis LMG 20103 chromosome, complete genomeGtrA2e-30130
NC_016832:531208:542317542317542628312Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bactoprenol-linked glucose translocase3e-30130
NC_012880:135508:145783145783146142360Dickeya dadantii Ech703, complete genomeGtrA family protein1e-29128
NC_009792:1739970:174802717480271748452426Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-28122
NC_014306:3210311:322003932200393220413375Erwinia billingiae Eb661, complete genomeBactoprenol-linked glucose translocase1e-25115
NC_006300:600516:615930615930616304375Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein2e-23107
NC_012913:626449:634490634490634846357Aggregatibacter aphrophilus NJ8700, complete genomebactoprenol-linked glucose translocase9e-23105
NC_016513:1185241:119375811937581194117360Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completebactoprenol-linked glucose translocase1e-21101
NC_013971:335247:350340350340350732393Erwinia amylovora ATCC 49946 chromosome, complete genomephage-encoded bactoprenol-linked glucose transferase2e-21100
NC_014121:3235911:324494732449473245108162Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebactoprenol-linked glucose translocase5e-1889.7
NC_017328:2153083:216488321648832165257375Shigella flexneri 2002017 chromosome, complete genomeBactoprenol-linked glucose translocase3e-1580.5
NC_004741:2081649:209344920934492093823375Shigella flexneri 2a str. 2457T, complete genomeglycosyl translocase3e-1580.5
NC_004337:2098736:211058221105822110956375Shigella flexneri 2a str. 301, complete genomeglycosyl translocase3e-1580.5
NC_014618:1752434:177176017717601772110351Enterobacter cloacae SCF1 chromosome, complete genomeGtrA family protein7e-1475.9