Pre_GI: BLASTP Hits

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Query: NC_007492:1735595:1737540 Pseudomonas fluorescens PfO-1, complete genome

Start: 1737540, End: 1738325, Length: 786

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein4e-111400
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR2e-94345
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR2e-88325
NC_009512:1691930:169690316969031697679777Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliR2e-88325
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein3e-87321
NC_009654:3849774:387610238761023876884783Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliR9e-48190
NC_014366:1814000:183494918349491835728780Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliR1e-47189
NC_013851:3300278:330354133035413304323783Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliR2e-44179
NC_019940:293476:300920300920301693774Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliR1e-42173
NC_009792:2688747:268874726887472689520774Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-27123
NC_014562:1844268:187554118755411876326786Pantoea vagans C9-1 chromosome, complete genomeFlagellar biosynthetic protein fliR3e-27122
NC_013892:2689645:269080526908052691587783Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthetic protein, regulator2e-23109
NC_009381:522731:550850550850551623774Yersinia pestis Pestoides F chromosome, complete genomeflagellar assembly protein5e-23108
NC_003143:741169:770010770010770783774Yersinia pestis CO92, complete genomeputative flagellar assembly protein5e-23108
NC_008149:650706:678873678873679646774Yersinia pestis Nepal516, complete genomeflagellar assembly protein5e-23108
NC_005810:3333000:336121233612123361985774Yersinia pestis biovar Microtus str. 91001, complete genomeflagellar biosynthetic protein FliR5e-23108
NC_004344:26828:550395503955815777Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-22105
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein1e-21103
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR1e-20100
NC_010515:1618093:165436216543621655159798Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar biosynthetic protein FliR2e-2099.4
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR1e-1997.1
NC_013223:685628:707734707734708516783Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliR4e-1891.7
NC_007759:1356439:135849013584901359269780Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein6e-1787.8
NC_000918:1353310:137854913785491379325777Aquifex aeolicus VF5, complete genomeflagellar biosynthetic protein FliR1e-1687
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir2e-1686.3
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR3e-1685.5
NC_020409:168916:186269186269187060792Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar biosynthetic protein fliR1e-1480.5
NC_017243:1499757:150607415060741506835762Brachyspira intermedia PWS/A chromosome, complete genomeflagellar biosynthetic protein fliR5e-1478.2
NC_009253:2615777:261684126168412617608768Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthesis protein FliR8e-1477.4
NC_012225:377441:381131381131381892762Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein fliR9e-1477.4
NC_014150:233194:249501249501250304804Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliR2e-1376.6
NC_019908:852230:867123867123867926804Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar biosynthesis protein FliR3e-1375.9
NC_018604:1329228:133032913303291331132804Brachyspira pilosicoli WesB complete genomeflagellar biosynthesis protein FliR6e-1374.7
NC_018607:1134900:113600211360021136805804Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliR6e-1374.7
NC_014330:2409559:241229724122972413058762Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar biosynthesis protein FliR1e-1273.9
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR2e-1273.2
NC_016894:2931213:293522829352282935983756Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliR2e-1272.8
NC_012791:2386000:240507724050772405796720Variovorax paradoxus S110 chromosome 1, complete genometype III secretion system inner membrane R protein3e-1272.4
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein7e-1271.2
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR7e-1270.9
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR1e-1170.1
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR2e-1170.1
NC_008576:4701930:107331073311533801Magnetococcus sp. MC-1, complete genomeflagellar biosynthetic protein FliR3e-1065.9
NC_010674:858397:8725658725658744061842Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein4e-1065.1
NC_010723:833870:8508728508728527041833Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein6e-1064.7
NC_011126:555483:589051589051589827777Hydrogenobaculum sp. Y04AAS1, complete genometype III secretion system inner membrane R protein3e-0962.4
NC_016893:43234:562395623957015777Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar export pore protein9e-0960.8
NC_009617:4911595:4913794491379449156351842Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB2e-0859.7
NC_013971:1660144:168608816860881686858771Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-0859.3
NC_013961:1622616:164856016485601649330771Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaR2e-0859.3
NC_012214:2221702:224179622417962242566771Erwinia pyrifoliae Ep1/96, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus3e-0859.3
NC_009698:2649453:2649453264945326512821830Clostridium botulinum A str. Hall chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB7e-0857.8
NC_010520:2860960:2860960286096028627891830Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthetic protein FliR/FlhB1e-0757
NC_009664:533021:536377536377537201825Kineococcus radiotolerans SRS30216, complete genomeflagellar biosynthetic protein FliR2e-0756.2
NC_020291:4903981:4924711492471149265491839Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FlhB2e-0756.2
NC_012440:659646:664173664173664955783Persephonella marina EX-H1, complete genomeflagellar biosynthetic protein FliR2e-0756.2
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB2e-0756.2
NC_016901:2661971:266197126619712662771801Shewanella baltica OS678 chromosome, complete genometype III secretion protein SpaR/YscT/HrcT3e-0755.8
NC_009997:2699644:270205427020542702854801Shewanella baltica OS195, complete genometype III secretion protein SpaR/YscT/HrcT3e-0755.8
NC_013971:2876733:289699928969992897763765Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein3e-0755.8
NC_013961:851044:873537873537874301765Erwinia amylovora, complete genomeSurface presentation of antigens protein spaR3e-0755.8
NC_014926:1381152:141077914107791411558780Thermovibrio ammonificans HB-1 chromosome, complete genomeflagellar biosynthetic protein FliR4e-0755.5
NC_014560:171931:176676176676177443768Helicobacter pylori SJM180 chromosome, complete genomeflagellar biosynthesis protein FliR6e-0754.7
NC_010694:2971170:299086429908642991628765Erwinia tasmaniensis, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus1e-0653.5
NC_010694:2138000:215439321543932155121729Erwinia tasmaniensis, complete genomeType III secretion apparatus2e-0653.1
NC_009802:1525144:155836215583621559123762Campylobacter concisus 13826, complete genomeflagellar biosynthetic protein FliR4e-0652
NC_013361:5319497:533690553369055337681777Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscT4e-0652
NC_013353:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscT4e-0652
AP010958:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscT4e-0652