Pre_GI: BLASTP Hits

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Query: NC_006510:1731939:1765169 Geobacillus kaustophilus HTA426, complete genome

Start: 1765169, End: 1765612, Length: 444

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015634:959396:984111984111984545435Bacillus coagulans 2-6 chromosome, complete genomeBadM/Rrf2 family transcriptional regulator1e-36151
NC_006513:1695487:171563317156331716094462Azoarcus sp. EbN1, complete genomepredicted transcriptional regulator3e-34143
NC_012988:4387735:439601743960174396493477Methylobacterium extorquens DM4, complete genomeRrf2 family transcriptional regulator5e-33139
NC_012808:3897751:390655139065513907027477Methylobacterium extorquens AM1, complete genometranscriptional regulator, rrf2 family5e-33139
NC_011999:728353:735879735879736295417Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein1e-31135
NC_008577:44184:566305663057085456Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, BadM/Rrf2 family3e-29127
NC_008209:761487:763317763317763787471Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-28124
NC_009720:3377071:337865933786593379108450Xanthobacter autotrophicus Py2, complete genomeBadM/Rrf2 family transcriptional regulator3e-28123
NC_007940:669143:672492672492672902411Rickettsia bellii RML369-C, complete genomePutative transcriptional regulator2e-27120
NC_009883:641491:644840644840645289450Rickettsia bellii OSU 85-389, complete genomePutative transcriptional regulator3e-27120
NC_006513:286549:309579309579310214636Azoarcus sp. EbN1, complete genomepredicted transcriptional regulator, rf2 family2e-26117
NC_014394:808734:810507810507810938432Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family2e-26117
NC_016050:771752:783334783334783762429Rickettsia japonica YH, complete genomeputative transcriptional regulator9e-26115
NC_015866:767790:779257779257779685429Rickettsia heilongjiangensis 054 chromosome, complete genomePutative transcriptional regulator2e-25114
NC_013446:2761000:276345027634502763896447Comamonas testosteroni CNB-2, complete genometranscriptional regulator, BadM/Rrf2 family2e-25114
NC_009254:745706:749444749444749956513Burkholderia vietnamiensis G4 chromosome 3, complete sequenceBadM/Rrf2 family transcriptional regulator4e-25113
NC_013422:991500:997874997874998326453Halothiobacillus neapolitanus c2, complete genometranscriptional regulator, BadM/Rrf2 family6e-24109
NC_017059:2922000:294185829418582942292435Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator2e-22104
NC_016914:772025:783660783660784088429Rickettsia rickettsii str. Hino chromosome, complete genomeRrf2 family protein3e-22103
NC_016911:771916:783551783551783979429Rickettsia rickettsii str. Hauke chromosome, complete genomeRrf2 family protein3e-22103
NC_016909:771542:783176783176783604429Rickettsia rickettsii str. Arizona chromosome, complete genomeRrf2 family protein3e-22103
NC_010263:771901:783536783536783964429Rickettsia rickettsii str. Iowa, complete genomeRrf2 family protein3e-22103
NC_009077:1027357:102818110281811028642462Mycobacterium sp. JLS, complete genometranscriptional regulator, BadM/Rrf2 family5e-1992.8
NC_014210:3817948:383259538325953833026432Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, BadM/Rrf2 family1e-1685.1
NC_017167:2259413:226118022611802261467288Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1AsnC family transcriptional regulator2e-1581.3
NC_010001:1:114341143411871438Clostridium phytofermentans ISDg, complete genometranscriptional regulator, BadM/Rrf2 family2e-1581.3
NC_012803:361127:379880379880380353474Micrococcus luteus NCTC 2665, complete genomerrf2 family protein, putative transcriptional regulator6e-1579.7
NC_015437:918614:933404933404933835432Selenomonas sputigena ATCC 35185 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family9e-1579
NC_012034:1783912:180473918047391805191453Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, BadM/Rrf2 family1e-1375.5
NC_014377:1089894:110347411034741103926453Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family1e-1375.1
NC_015949:1180755:120145512014551201907453Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeBadM/Rrf2 family transcriptional regulator2e-1374.3
NC_014721:1777644:179835917983591798811453Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetranscriptional regulator, badm/rrf2 family2e-1374.3
NC_014657:1518721:153989615398961540348453Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, badm/rrf2 family2e-1374.3
NC_014652:1032711:105395410539541054406453Caldicellulosiruptor hydrothermalis 108 chromosome, completetranscriptional regulator, badm/rrf2 family3e-1373.9
NC_014392:969498:989139989139989591453Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family8e-1372.4
NC_009437:2367842:238853223885322388984453Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeBadM/Rrf2 family transcriptional regulator1e-1272
NC_018515:989616:995290995290995742453Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRrf2 family transcriptional regulator3e-1270.9
NC_009428:807577:810129810129810698570Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeBadM/Rrf2 family transcriptional regulator5e-1270.1
NC_011830:3786173:380502638050263805466441Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, BadM/Rrf2 family6e-1269.7
NC_016642:1990684:199633319963331996725393Pseudovibrio sp. FO-BEG1 chromosome, complete genometranscriptional regulator, Rrf27e-1269.3
NC_015589:626321:641545641545641970426Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRrf2 family transcriptional regulator1e-1168.6
NC_014221:1167261:117247511724751172915441Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family2e-1167.8
NC_010718:304440:319008319008319475468Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, BadM/Rrf2 family2e-1167.8
NC_019978:1816940:183458218345821835040459Halobacteroides halobius DSM 5150, complete genomerrf2 family protein, putative transcriptional regulator3e-1063.9
NC_009012:2953638:299313429931342993577444Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, BadM/Rrf2 family4e-1063.5
NC_014328:1307490:130946913094691309915447Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator8e-1062.4
NC_014844:2158318:215831821583182158755438Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRrf2 family transcriptional regulator3e-0960.8
NC_013740:2141523:215595221559522156374423Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, BadM/Rrf2 family2e-0960.8
NC_013385:1882549:190942419094241909837414Ammonifex degensii KC4, complete genometranscriptional regulator, BadM/Rrf2 family2e-0960.8
NC_015589:2480365:248474324847432485153411Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRrf2 family transcriptional regulator3e-0960.5
NC_008593:1461771:147682414768241477258435Clostridium novyi NT, complete genomeiron-sulfur cluster assembly transcription factor IscR4e-0960.1
NC_021182:2422226:243676224367622437202441Clostridium pasteurianum BC1, complete genomerrf2 family protein, putative transcriptional regulator5e-0960.1
NC_011979:2892119:289631228963122896725414Geobacter sp. FRC-32, complete genometranscriptional regulator, BadM/Rrf2 family6e-0959.7
NC_011145:1435742:143574214357421436224483Anaeromyxobacter sp. K, complete genometranscriptional regulator, BadM/Rrf2 family5e-0959.7
NC_009495:2685646:270636227063622706808447Clostridium botulinum A str. ATCC 3502 chromosome, complete genometranscriptional regulator5e-0959.7
NC_009699:2733529:275432327543232754769447Clostridium botulinum F str. Langeland chromosome, complete genomerrF2 family protein5e-0959.7
NC_020272:20435:261892618926692504Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator iscR8e-0959.3
NC_014551:483773:490676490676491179504Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator1e-0858.9
NC_003030:1811820:182470418247041825123420Clostridium acetobutylicum ATCC 824, complete genomePredicted transcriptional regulator (HTH winged helix type)9e-0958.9
NC_015687:1811573:182630418263041826723420Clostridium acetobutylicum DSM 1731 chromosome, complete genometranscriptional regulator9e-0958.9
NC_017295:1809386:182411718241171824536420Clostridium acetobutylicum EA 2018 chromosome, complete genometranscriptional regulator (HTH winged helix type)9e-0958.9
NC_017188:461177:478328478328478831504Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator1e-0858.5
NC_013891:575746:587430587430587846417Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeRrf2 family transcriptional regulator protein1e-0858.5
NC_016012:805680:810599810599811045447Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeRRF2 family protein1e-0858.2
NC_013766:679906:679906679906680322417Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-0858.2
NC_008262:1950205:195474719547471955208462Clostridium perfringens SM101, complete genomeuncharacterized conserved protein of YjeB/RRF2 family5e-0856.6
NC_016627:2524307:253149425314942531952459Clostridium clariflavum DSM 19732 chromosome, complete genomerrf2 family protein, putative transcriptional regulator5e-0856.6
NC_015389:1298689:132255113225511323003453Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family6e-0856.2
NC_014221:1932903:193711319371131937562450Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family8e-0855.8
NC_009483:2489000:252245825224582522871414Geobacter uraniireducens Rf4 chromosome, complete genomeBadM/Rrf2 family transcriptional regulator9e-0855.8
NC_011725:4373721:437490243749024375318417Bacillus cereus B4264 chromosome, complete genomerrf2 family protein9e-0855.8
NC_006933:1051873:106659710665971067028432Brucella abortus biovar 1 str. 9-941 chromosome II, completeRfF2 family protein1e-0755.5
NC_010520:3674883:369132836913283691729402Clostridium botulinum A3 str. Loch Maree, complete genomeputative transcriptional regulator1e-0755.5
NC_003318:183914:187471187471187959489Brucella melitensis 16M chromosome II, complete sequenceRRF2 FAMILY PROTEIN1e-0755.5
NC_010740:1051000:106578510657851066285501Brucella abortus S19 chromosome 2, complete sequenceRRF2 family protein1e-0755.5
NC_012658:3678000:368338836833883683789402Clostridium botulinum Ba4 str. 657 chromosome, complete genomeRRF2 family protein1e-0755.5
NC_010337:803748:803748803748804233486Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, rrf2 family, putative1e-0755.1
NC_014963:113015:135717135717136211495Terriglobus saanensis SP1PR4 chromosome, complete genomeBadM/Rrf2 family transcriptional regulator2e-0754.7
NC_011899:948790:955560955560956015456Halothermothrix orenii H 168, complete genometranscriptional regulator, BadM/Rrf2 family2e-0754.3
NC_016627:3158353:317550531755053175954450Clostridium clariflavum DSM 19732 chromosome, complete genomerrf2 family protein, putative transcriptional regulator2e-0754.3
NC_011297:1357947:137869413786941379128435Dictyoglomus thermophilum H-6-12, complete genomeRRF2 protein family2e-0754.3
NC_007907:5104476:510869651086965109076381Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0754.3
NC_010104:1096081:111084711108471111347501Brucella canis ATCC 23365 chromosome II, complete sequencerrf2 family protein4e-0753.5
NC_010167:1287000:130504513050451305545501Brucella suis ATCC 23445 chromosome II, complete sequenceTranscriptional regulator, Rrf2 family protein4e-0753.5
NC_003366:2057656:206543720654372065823387Clostridium perfringens str. 13, complete genomehypothetical protein6e-0753.1
NC_013204:74855:100493100493100969477Eggerthella lenta DSM 2243, complete genometranscriptional regulator, BadM/Rrf2 family9e-0752.4
NC_008571:365047:372300372300372713414Gramella forsetii KT0803, complete genomeRrf2-like transcriptional regulator protein2e-0651.6
NC_007705:1388607:141460314146031415061459Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein2e-0651.6
NC_006834:1414113:144025714402571440715459Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein2e-0651.2
NC_009668:1591290:160547816054781605909432Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceBadM/Rrf2 family transcriptional regulator5e-0650.1
NC_013520:571647:586930586930587361432Veillonella parvula DSM 2008, complete genometranscriptional regulator, BadM/Rrf2 family5e-0650.1
NC_010338:4015928:403720440372044037644441Caulobacter sp. K31, complete genometranscriptional regulator, BadM/Rrf2 family5e-0650.1
NC_017098:1542284:154845215484521548958507Spirochaeta africana DSM 8902 chromosome, complete genomeRrf2 family transcriptional regulator6e-0649.7
NC_008343:1470360:147781114778111478350540Granulibacter bethesdensis CGDNIH1, complete genomerrf2 family protein8e-0649.3