Pre_GI: BLASTP Hits

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Query: NC_002971:1379567:1392349 Coxiella burnetii RSA 493, complete genome

Start: 1392349, End: 1392954, Length: 606

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011528:535680:540946540946541551606Coxiella burnetii CbuK_Q154, complete genomeNADH-quinone oxidoreductase chain J2e-90331
NC_010117:1461502:147293014729301473535606Coxiella burnetii RSA 331, complete genomeNADH dehydrogenase (ubiquinone), J subunit2e-90331
NC_011527:525759:534330534330534935606Coxiella burnetii CbuG_Q212, complete genomeNADH-quinone oxidoreductase chain J2e-89328
NC_007484:2893878:290755329075532908158606Nitrosococcus oceani ATCC 19707, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 66e-34143
NC_013861:311908:320312320312320956645Legionella longbeachae NSW150, complete genomeNADH-quinone oxidoreductase chain J7e-34143
NC_006369:3058000:307756030775603078219660Legionella pneumophila str. Lens, complete genomeNADH-quinone oxidoreductase chain J6e-33140
NC_006368:3211998:321950532195053220164660Legionella pneumophila str. Paris, complete genomeNADH-quinone oxidoreductase chain J5e-33140
NC_012968:1731976:174374917437491744429681Methylotenera mobilis JLW8, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 63e-32138
NC_013194:4305205:431777943177794318381603Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeNADH-ubiquinone/plastoquinone oxidoreductase chain 64e-32137
NC_010531:708049:715078715078715725648Polynucleobacter necessarius STIR1, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 65e-32137
NC_009379:1034740:104660010466001047247648Polynucleobacter sp. QLW-P1DMWA-1, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 68e-32136
NC_008702:1514707:153346915334691534071603Azoarcus sp. BH72, complete genomeNADH-ubiquinone oxidoreductase, chain J probable.1e-31135
NC_015731:3077842:309068230906823091287606Nitrosomonas sp. Is79A3 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 64e-31134
NC_017033:1525132:152669515266951527348654Frateuria aurantia DSM 6220 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)7e-31133
NC_013851:2729000:274287127428712743509639Allochromatium vinosum DSM 180 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 62e-30132
NC_015222:2683056:269448726944872695092606Nitrosomonas sp. AL212 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 67e-30130
NC_008781:1507384:152115015211501521797648Polaromonas naphthalenivorans CJ2, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 63e-29128
NC_008610:253483:260325260325260933609Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),NADH-ubiquinone/plastoquinone oxidoreductase, chain 63e-29127
NC_015581:771482:789793789793790434642Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 63e-29127
NC_007298:1029841:103793010379301038526597Dechloromonas aromatica RCB, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 62e-28125
NC_009465:224564:239369239369239980612Candidatus Vesicomyosocius okutanii HA, complete genomeNADH dehydrogenase I chain J5e-27120
NC_007908:1600244:161517516151751615834660Rhodoferax ferrireducens T118, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 62e-26119
NC_002978:918000:925042925042925629588Wolbachia endosymbiont of Drosophila melanogaster, complete genomeNADH dehydrogenase I, J subunit3e-25115
NC_012416:979484:985173985173985760588Wolbachia sp. wRi, complete genomeNADH dehydrogenase I, J subunit3e-24111
NC_010981:1053533:106083710608371061424588Wolbachia pipientis, complete genomeNADH dehydrogenase I, J subunit8e-24110
NC_006833:806467:814815814815815348534Wolbachia endosymbiont strain TRS of Brugia malayi, completeNADH:ubiquinone oxidoreductase chain J7e-24110
NC_008344:950241:957367957367957972606Nitrosomonas eutropha C91, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 65e-24110
NC_016043:471719:480481480481481365885Taylorella asinigenitalis MCE3 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit J1e-23109
NC_011992:889985:904994904994905659666Acidovorax ebreus TPSY, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 63e-23108
NC_014914:1092546:110553511055351106326792Taylorella equigenitalis MCE9 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain J1e-22106
NC_009883:1429000:145053014505301451147618Rickettsia bellii OSU 85-389, complete genomeNADH dehydrogenase subunit J8e-1993.6
NC_019907:287339:301646301646302254609Liberibacter crescens BT-1 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit J3e-1891.7
NC_012985:815040:831298831298831897600Candidatus Liberibacter asiaticus str. psy62, complete genomeNADH dehydrogenase subunit J4e-1891.3
NC_007205:841818:857541857541858173633Candidatus Pelagibacter ubique HTCC1062, complete genomeNADH Dehydrogenase I Chain J6e-1890.9
NC_018643:482676:499390499390500022633Alpha proteobacterium HIMB5 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 66e-1890.5
NC_020299:532000:540824540824541465642Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeNADH dehydrogenase I subunit J3e-1684.7
NC_008358:1789816:179529917952991795892594Hyphomonas neptunium ATCC 15444, complete genomeNADH-quinone oxidoreductase, J subunit4e-1684.7
NC_019814:678404:680706680706681350645Candidatus Kinetoplastibacterium blastocrithidii (ex StrigomonasNADH-quinone oxidoreductase subunit J8e-1683.6
NC_016510:4343:202222022220731510Flavobacterium columnare ATCC 49512 chromosome, complete genomeNADH dehydrogenase I, J subunit3e-1375.1
NC_008601:1733940:178611517861151786720606Francisella tularensis subsp. novicida U112, complete genomeNADH dehydrogenase I, J subunit7e-1373.9
NC_014318:529010:530867530867531742876Amycolatopsis mediterranei U32 chromosome, complete genomeNADH dehydrogenase I subunit J6e-1373.9
NC_017186:529024:530881530881531756876Amycolatopsis mediterranei S699 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit J6e-1373.9
NC_010677:96470:111462111462112067606Francisella tularensis subsp. mediasiatica FSC147, complete genomeNADH dehydrogenase I, J subunit8e-1373.6
NC_008369:1702885:175519517551951755800606Francisella tularensis subsp. holarctica OSU18, complete genomeNADH dehydrogenase (ubiquinone)8e-1373.6
NC_009749:1699152:175146217514621752067606Francisella tularensis subsp. holarctica FTA, complete genomeNADH dehydrogenase i, j subunit8e-1373.6
NC_007880:1703346:175556517555651756170606Francisella tularensis subsp. holarctica, complete genomeNADH dehydrogenase I, J subunit8e-1373.6
NC_006570:24636:396293962940234606Francisella tularensis subsp. tularensis Schu 4, complete genomeNADH dehydrogenase I, J subunit8e-1373.6
NC_008245:24652:396453964540250606Francisella tularensis subsp. tularensis FSC 198, complete genomeNADH dehydrogenase I, J subunit8e-1373.6
NC_009257:109528:124523124523125128606Francisella tularensis subsp. tularensis WY96-3418 chromosome,NADH dehydrogenase I subunit J8e-1373.6
NC_016933:24654:396473964740252606Francisella tularensis TIGB03 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit J8e-1373.6
NC_016937:24654:396473964740252606Francisella tularensis subsp. tularensis TI0902 chromosome,NADH-ubiquinone oxidoreductase subunit J8e-1373.6
NC_020054:943945:962507962507963064558Fibrella aestuarina BUZ 2 drat genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 61e-1272.8
NC_007797:441782:451464451464452069606Anaplasma phagocytophilum HZ, complete genomeNADH dehydrogenase I, J subunit2e-1272.8
NC_014758:310394:328651328651329151501Calditerrivibrio nitroreducens DSM 19672 chromosome, completeNADH dehydrogenase subunit j1e-1169.3
NC_015681:1685672:169331716933171693853537Thermodesulfatator indicus DSM 15286 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 64e-1167.8
NC_013939:1995546:200585020058502006350501Deferribacter desulfuricans SSM1, complete genomeNADH-quinone oxidoreductase subunit J5e-1167.8
NC_015696:517941:533202533202533807606Francisella sp. TX077308 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit J5e-1167.4
NC_015672:203139:218417218417218917501Flexistipes sinusarabici DSM 4947 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 66e-1167.4
NC_010336:996661:101174010117401012345606Francisella philomiragia subsp. philomiragia ATCC 25017, completeNADH dehydrogenase I, J subunit9e-1166.6
NC_010473:2465844:248512924851292485683555Escherichia coli str. K-12 substr. DH10B, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit J2e-1065.9
NC_000913:2373984:239336423933642393918555Escherichia coli K12, complete genomeNADH dehydrogenase subunit J2e-1065.9
AC_000091:2379670:240001224000122400566555Escherichia coli W3110 DNA, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit J2e-1065.9
NC_012759:2261416:227916922791692279723555Escherichia coli BW2952 chromosome, complete genomeNADH dehydrogenase subunit J2e-1065.9
NC_010814:3332088:334969733496973350209513Geobacter lovleyi SZ, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 62e-1065.5
NC_014655:3615426:363054436305443631080537Leadbetterella byssophila DSM 17132 chromosome, complete genomeNADH dehydrogenase subunit j2e-1065.5
NC_015702:2902934:291277629127762913282507Parachlamydia acanthamoebae UV7, complete genomehypothetical protein9e-1063.5
NC_011979:537862:545983545983546489507Geobacter sp. FRC-32, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 62e-0962.4
NC_014774:1019273:102847110284711028917447Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeNADH dehydrogenase subunit J2e-0962
NC_002939:360462:376879376879377382504Geobacter sulfurreducens PCA, complete genomeNADH dehydrogenase I, J subunit6e-0960.8
NC_007204:696972:705580705580706299720Psychrobacter arcticus 273-4, complete genomeprobable NADH dehydrogenase I, J subunit2e-0858.9
NC_014228:2812000:282157628215762822103528Xenorhabdus nematophila ATCC 19061, complete genomeNADH dehydrogenase I chain J2e-0858.9
NC_005966:715591:723502723502724023522Acinetobacter sp. ADP1, complete genomeNADH dehydrogenase I chain J2e-0858.9
NC_018419:862500:871236871236871799564Secondary endosymbiont of Ctenarytaina eucalypti chromosome,NADH:ubiquinone oxidoreductase subunit 6 (chain J)7e-0857.4
NC_017162:827567:836757836757837248492Acinetobacter baumannii 1656-2 chromosome, complete genomenuoJ8e-0857
NC_017387:832000:839996839996840487492Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)8e-0857
NC_009483:4885914:489749648974964898002507Geobacter uraniireducens Rf4 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase subunit 69e-0856.6
NC_010611:797351:806025806025806546522Acinetobacter baumannii ACICU, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)1e-0756.2
NC_014259:3369000:337800133780013378522522Acinetobacter sp. DR1 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)1e-0756.2
NC_017171:825994:834668834668835189522Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeNADH dehydrogenase I subunit J1e-0756.2
NC_016603:23756:324133241332931519Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeNADH dehydrogenase I subunit J1e-0756.2
NC_011595:3015895:302788830278883028406519Acinetobacter baumannii AB307-0294, complete genomeNADH-quinone oxidoreductase subunit J1e-0756.2
NC_011831:1969792:198390019839001984553654Chloroflexus aggregans DSM 9485, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 61e-0756.2
NC_014972:2328228:234551223455122345988477Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 62e-0755.8
NC_010554:1871000:187884918788491879382534Proteus mirabilis HI4320, complete genomeNADH-quinone oxidoreductase chain J2e-0755.5
NC_004347:1038253:105053310505331051084552Shewanella oneidensis MR-1, complete genomeNADH dehydrogenase subunit J2e-0755.5
NC_015318:219484:234214234214234717504Hippea maritima DSM 10411 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 63e-0755.1
NC_007517:3751107:376302037630203763523504Geobacter metallireducens GS-15, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 63e-0755.1
NC_015224:3191000:319860231986023199147546Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,NADH dehydrogenase subunit J6e-0754.3
NC_008800:1497746:150668615066861507231546Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,NADH dehydrogenase subunit J6e-0754.3
NC_010634:2960000:296962229696222970167546Yersinia pseudotuberculosis PB1/+, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 67e-0753.9
NC_008149:2411161:242207324220732422618546Yersinia pestis Nepal516, complete genomeNADH dehydrogenase I chain J7e-0753.9
NC_010465:1724000:173418617341861734731546Yersinia pseudotuberculosis YPIII, complete genomeNADH dehydrogenase (quinone)7e-0753.9
NC_004088:1801819:181135818113581811903546Yersinia pestis KIM, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_010159:1861465:187234018723401872885546Yersinia pestis Angola, complete genomeNADH-quinone oxidoreductase, J subunit7e-0753.9
NC_006155:3040769:305172430517243052269546Yersinia pseudotuberculosis IP 32953, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_003143:2849377:286025928602592860804546Yersinia pestis CO92, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_005810:2613456:262433826243382624883546Yersinia pestis biovar Microtus str. 91001, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_017265:1521276:153242515324251532970546Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,NADH:ubiquinone oxidoreductase, membrane subunit J7e-0753.9
NC_017168:2892000:290163229016322902177546Yersinia pestis A1122 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit J7e-0753.9
NC_017160:2740870:274877627487762749321546Yersinia pestis D182038 chromosome, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_017154:3139614:314915331491533149698546Yersinia pestis D106004 chromosome, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_009708:1694685:170280417028041703349546Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNADH dehydrogenase subunit J7e-0753.9
NC_014973:5099543:513167351316735132176504Geobacter sp. M18 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 69e-0753.5
NC_011296:1086223:109579010957901096305516Thermodesulfovibrio yellowstonii DSM 11347, complete genomeNADH-quinone oxidoreductase chain j2e-0652
NC_017094:1703000:171575117157511716260510Leptospirillum ferrooxidans C2-3, complete genomeNADH dehydrogenase subunit J2e-0652
NC_020075:590481:599654599654600205552Candidatus Blochmannia chromaiodes str. 640, complete genomeNADH-quinone oxidoreductase subunit J4e-0651.2