Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:1038253 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
103825310403612109hypothetical proteinBLASTP
10407891041751963dienelactone hydrolase family proteinQuickGO ontologyBLASTP
104215010437301581hypothetical NaH antiporterQuickGO ontologyBLASTP
10439871044865879transposase putativeQuickGO ontologyBLASTP
104528110467441464NADH dehydrogenase subunit NQuickGO ontologyBLASTP
104674110482851545NADH dehydrogenase subunit MQuickGO ontologyBLASTP
10477851048264480hypothetical Valyl-tRNA synthetaseQuickGO ontology
104838410502311848NADH dehydrogenase subunit LQuickGO ontologyBLASTP
10502281050536309NADH dehydrogenase I K subunitQuickGO ontologyBLASTP
10505331051084552NADH dehydrogenase subunit JQuickGO ontologyBLASTP
10510951051637543NADH dehydrogenase subunit IQuickGO ontologyBLASTP
10516461052614969NADH dehydrogenase subunit HQuickGO ontologyBLASTP
105261110553402730NADH dehydrogenase gamma subunitQuickGO ontologyBLASTP
105538210567671386NADH dehydrogenase I F subunitQuickGO ontologyBLASTP
10562101056404195hypothetical protein
10567641057306543ATP synthase subunit EQuickGO ontologyBLASTP
105738810591931806NADH dehydrogenase I CD subunitsQuickGO ontologyBLASTP
10591971059871675NADH dehydrogenase beta subunitQuickGO ontologyBLASTP
10599011060305405NADH dehydrogenase alpha subunitQuickGO ontologyBLASTP
10620641062873810ISSod1 transposase OrfBQuickGO ontologyBLASTP
10629331063223291ISSod1 transposase OrfAQuickGO ontologyBLASTP
106381210650141203ISSod4 transposaseQuickGO ontologyBLASTP
10651491065493345hypothetical protein
10656631065875213hypothetical protein
10659111066333423hypothetical protein
1066803107053737355-methyltetrahydrofolate--homocysteine methyltransferaseQuickGO ontologyBLASTP