Pre_GI: BLASTN Hits

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Query: NC_016445:2012294 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2012294, End: 2035104, Length: 22811

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002505:2537655*2537655256310125447Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete032260BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome0896BLASTN svgBLASTP svg
NC_009800:12162*121623729725136Escherichia coli HS, complete genome0880BLASTN svgBLASTP svg
NC_011748:11394*113943596224569Escherichia coli 55989, complete genome0872BLASTN svgBLASTP svg
CU928145:11394*113943596224569Escherichia coli 55989 chromosome, complete genome0872BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome0837BLASTN svgBLASTP svg
CP002185:11921*119213722925309Escherichia coli W, complete genome0809BLASTN svgBLASTP svg
CU928160:11381*113813595024570Escherichia coli IAI1 chromosome, complete genome0785BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome3e-151543BLASTN svgBLASTP svg
NC_004129:957890*95789098009922210Pseudomonas fluorescens Pf-5, complete genome1e-79305BLASTN svgBLASTP svg
NC_021150:4311902*4311902433613524234Azotobacter vinelandii CA6, complete genome6e-66260BLASTN svgBLASTP svg
NC_012560:4311906*4311906433613924234Azotobacter vinelandii DJ, complete genome6e-66260BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome2e-53218BLASTN svgBLASTP svg
NC_010159:30339893033989305747023482Yersinia pestis Angola, complete genome3e-43184BLASTN svgBLASTP svg
NC_007947:79745679745682317625721Methylobacillus flagellatus KT, complete genome1e-36163BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome9e-34153BLASTN svgBLASTP svg
NC_021066:32015003201500323157930080Raoultella ornithinolytica B6, complete genome4e-33151BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_009654:29402782940278295966519388Marinomonas sp. MWYL1, complete genome1e-23119BLASTN svgBLASTP svg
NC_008570:30132633013263304329130029Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-23119BLASTN svgBLASTP svg
NC_005296:45742134574213461698142769Rhodopseudomonas palustris CGA009, complete genome1e-23119BLASTN svgBLASTP svg
AP010958:12660*126603398921330Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-22115BLASTN svgBLASTP svg
NC_002695:12000*120003517323174Escherichia coli O157:H7 str. Sakai, complete genome2e-22115BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome2e-22115BLASTN svgBLASTP svg
NC_010531:70804970804973271224664Polynucleobacter necessarius STIR1, complete genome2e-22115BLASTN svgBLASTP svg
NC_011004:4947980*4947980497058322604Rhodopseudomonas palustris TIE-1, complete genome2e-22115BLASTN svgBLASTP svg
NC_002528:148274*14827417635828085Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete1e-1799.6BLASTN svgBLASTP svg
NC_012914:6583000*6583000661468531686Paenibacillus sp. JDR-2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_018868:39430883943088397038227295Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_007912:1111093*1111093113935028258Saccharophagus degradans 2-40, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009901:46279984627998465009922102Shewanella pealeana ATCC 700345, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002655:12000*120003357021571Escherichia coli O157:H7 EDL933, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010336:85291585291587830125387Francisella philomiragia subsp. philomiragia ATCC 25017, complete7e-1383.8BLASTN svgBLASTP svg
NC_014836:155924*15592417823722314Desulfurispirillum indicum S5 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013730:59893875989387602360234216Spirosoma linguale DSM 74, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011146:22001422200142224285442713Geobacter bemidjiensis Bem, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010184:4909183*4909183495059941417Bacillus weihenstephanensis KBAB4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011184:2369662*2369662239577126110Vibrio fischeri MJ11 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_009465:813816*81381684287229057Candidatus Vesicomyosocius okutanii HA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011901:83708583708586771530631Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_013406:6568273*6568273660155033278Paenibacillus sp. Y412MC10 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014166:1424754*1424754147046045707Arcobacter nitrofigilis DSM 7299 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015942:10475761047576107197424399Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018419:50950050950052986620367Secondary endosymbiont of Ctenarytaina eucalypti chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_001263:66266666266668995627291Deinococcus radiodurans R1 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_003909:4854379*4854379490241548037Bacillus cereus ATCC 10987, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003997:4876415*4876415492062744213Bacillus anthracis str. Ames, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005945:4898841*4898841492869029850Bacillus anthracis str. Sterne, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005957:4904000*4904000492427720278Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-0765.9BLASTN svgBLASTP svg
NC_007530:4877500*4877500491960442105Bacillus anthracis str. 'Ames Ancestor', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008600:4898000*4898000493385035851Bacillus thuringiensis str. Al Hakam, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012472:4908245*4908245494735239108Bacillus cereus 03BB102, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014335:4848389*4848389487326124873Bacillus cereus biovar anthracis str. CI chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015410:61702061702063960722588Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009439:574437*57443759753523099Pseudomonas mendocina ymp, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010001:312500*31250033209919600Clostridium phytofermentans ISDg, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015559:35112313511231353107519845Marinomonas posidonica IVIA-Po-181 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015563:12409781240978126477223795Delftia sp. Cs1-4 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014924:72538072538075060925230Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013715:699400*69940072209922700Rothia mucilaginosa DY-18, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005071:87907*8790714203654130Prochlorococcus marinus str. MIT 9313, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome3e-0661.9BLASTN svgBLASTP svg