Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:312500 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
312520313446927thioredoxin reductaseQuickGO ontologyBLASTP
314508315044537sigma 54 modulation proteinribosomal protein S30EAQuickGO ontologyBLASTP
3154313180072577preprotein translocase SecA subunitQuickGO ontologyBLASTP
3182783192791002peptide chain release factor 2QuickGO ontologyBLASTP
319531319989459CheW proteinQuickGO ontologyBLASTP
3202083221961989excinuclease ABC B subunitQuickGO ontologyBLASTP
3222073250502844excinuclease ABC A subunitQuickGO ontologyBLASTP
325091325672582metal dependent phosphohydrolaseQuickGO ontologyBLASTP
3257773269401164beta-lactamase domain proteinQuickGO ontologyBLASTP
3276803293351656von Willebrand factor type AQuickGO ontologyBLASTP
3297753312981524GMP synthase large subunitQuickGO ontologyBLASTP