Pre_GI: BLASTN Hits

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Query: NC_015379:4630367 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 4630367, End: 4665599, Length: 35233

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012660:41494874149487417527325787Pseudomonas fluorescens SBW25 chromosome, complete genome0954BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome8e-97363BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-78301BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-78301BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome4e-77297BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome2e-72281BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome4e-68268BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome3e-65258BLASTN svgBLASTP svg
NC_015379:4691868*4691868471845126584Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-54222BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-52214BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-48202BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome3e-44188BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-42182BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-31145BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome6e-30141BLASTN svgBLASTP svg
NC_004129:3965947*3965947398362717681Pseudomonas fluorescens Pf-5, complete genome6e-30141BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_013959:15557991555799157565319855Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-24121BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome2e-23119BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-23119BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-22115BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome3e-22115BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome2e-20109BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome2e-20109BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_015563:43830004383000440526222263Delftia sp. Cs1-4 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_013446:32090003209000323064521646Comamonas testosteroni CNB-2, complete genome3e-19105BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome5e-18101BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome5e-18101BLASTN svgBLASTP svg
NC_008781:26550712655071268316628096Polaromonas naphthalenivorans CJ2, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007484:1229899*1229899125251522617Nitrosococcus oceani ATCC 19707, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_007614:26158826158828609924512Nitrosospira multiformis ATCC 25196 chromosome 1, complete8e-1797.6BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence8e-1797.6BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_013889:1202385*1202385122409321709Thioalkalivibrio sp. K90mix chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_012660:4558122*4558122459234134220Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1591.7BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,2e-1489.7BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1489.7BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1489.7BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_015733:29635482963548298726023713Pseudomonas putida S16 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_003112:744476*74447676938624911Neisseria meningitidis MC58, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-1283.8BLASTN svgBLASTP svg
NC_003919:5056650*5056650508530628657Xanthomonas axonopodis pv. citri str. 306, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete1e-1283.8BLASTN svgBLASTP svg
NC_015733:19767521976752200134124590Pseudomonas putida S16 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015856:17335001733500176113127632Collimonas fungivorans Ter331 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_020063:20772332077233210134824116Enterobacteriaceae bacterium strain FGI 57, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008782:2568027*2568027262351455488Acidovorax sp. JS42, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008752:72518972518977609450906Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007908:33639023363902338735723456Rhodoferax ferrireducens T118, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_006511:1506915*1506915154594239028Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1075.8BLASTN svgBLASTP svg
NC_003198:1621347*1621347164626724921Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-1075.8BLASTN svgBLASTP svg
NC_003197:1471349*1471349150894537597Salmonella typhimurium LT2, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009778:19562251956225198255126327Enterobacter sakazakii ATCC BAA-894, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010067:1507823*1507823153618428362Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-1075.8BLASTN svgBLASTP svg
NC_010102:16165301616530165555739028Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-1075.8BLASTN svgBLASTP svg
NC_011080:14707941470794150838537592Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-1075.8BLASTN svgBLASTP svg
NC_011149:17106011710601173914728547Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1075.8BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020260:19933441993344201786024517Cronobacter sakazakii Sp291, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-0971.9BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020260:12938601293860132559931740Cronobacter sakazakii Sp291, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012691:17430381743038178035537318Tolumonas auensis DSM 9187, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012792:70786470786472612718264Variovorax paradoxus S110 chromosome 2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007005:58822055882205592100338799Pseudomonas syringae pv. syringae B728a, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004129:43683564368356438728118926Pseudomonas fluorescens Pf-5, complete genome4e-0661.9BLASTN svgBLASTP svg